Oncorhynchus tshawytscha (Chinook salmon): 112236148
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Entry
112236148 CDS
T05605
Name
(RefSeq) ras-related protein Rab-40B
KO
K07928
Ras-related protein Rab-40
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112236148
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
otw04031
]
112236148
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
112236148
GTP-binding proteins [BR:
otw04031
]
Small (monomeric) G-proteins
Rab Family
Rab40
112236148
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
SOCS_box
Arf
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
112236148
NCBI-ProteinID:
XP_024260495
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All DBs
Position
LG25:complement(36456508..36519353)
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AA seq
288 aa
AA seq
DB search
MNHRTSPAKAYDFLLKFLLVGDSDVGKGEILASLEDGASESPYGYNMGIDYKTTTILLDG
RRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDITNRWSFDGIDRWIKEIDEHAPGVP
KILVGNRLHLAYKRQVTTEQAQLYAERLGVTFFEVSPLCNFNITESFTELARIVLMRHGM
ERLWRPNKVLSLQDLCCRSIVSCTPVHLVDKLPLPLALKSHLKSFSMANGLNARMMHGSS
YSVTTTNTTHIATKRTGGQLLKNKKCIRPQQLSPATAQSCTGNSCKIS
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacagaacaagccccgccaaggcttacgattttctgctcaagtttctcctggtc
ggggacagcgatgtgggaaagggtgagatacttgcgagcctcgaggacggagccagcgag
tctccatatggctacaacatgggaattgactacaagacgactacgatactcctagatgga
agaagagtcaagctgcagctctgggacacatctggccaggggcgcttctgcaccatcttc
cgctcttactccagaggagcacagggtgtgatcttggtctatgacatcaccaaccgatgg
tcctttgatggtattgacagatggataaaggagatagatgagcatgcaccaggagttccc
aagatcctggtgggtaaccggttacacctggcctacaagcgccaggtgaccacggagcag
gcccagctgtacgctgagaggttaggggtaaccttcttcgaggtcagcccgctgtgcaac
ttcaacatcacagagtccttcacagagctggccaggattgtcctgatgaggcacggtatg
gagagactctggagacccaacaaagtgttgagtctccaggacctgtgctgtcgttccatc
gtgtcttgcacccctgtccacctggtagacaagcttcctctccccctggccctcaagtcc
cacctcaagtctttctccatggccaacggcctcaatgcccgcatgatgcacggaagttcc
tactctgtcaccaccaccaacaccacccacatcgccaccaagaggactggaggtcagctg
ctgaaaaataaaaaatgtatccgccctcagcagctcagcccggcaaccgcacagagctgc
accggcaacagctgcaagatctcctag
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