Oncorhynchus tshawytscha (Chinook salmon): 112236188
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Entry
112236188 CDS
T05605
Name
(RefSeq) DENN domain-containing protein 5A isoform X3
KO
K20164
DENN domain-containing protein 5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112236188
Membrane trafficking [BR:
otw04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
112236188
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DENN
RUN
uDENN
dDENN
PLAT
ACT_5
Motif
Other DBs
NCBI-GeneID:
112236188
NCBI-ProteinID:
XP_024260543
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All DBs
Position
LG04:complement(71033545..71092206)
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AA seq
1297 aa
AA seq
DB search
MTTGFSSNSCRFADYFVICGLDTESGLEPDELSALCQYIEATKFRDGARGLASADEGENF
EQSPLRRTFKSKVLAHYPENVEWSPFDQDAVGMLCMPKGLAFRTQADTREPQFHSFIITR
EDGSRTYGFALTFYEEVTSKQICSAMQTLYHMHNAEQYDILHTPTTPRCPEDQRHLQPHP
LNPHPQHTLLPTPSISRLQRFNSYDISRDTLYVSKCICLIAPMAFPQACRKVLQQLHQAV
SSPQPPPLPLESYVYNILYEVPLPPAGRSLKFSGVYGPVVCQRPSTAELPLFDFPISQVF
ELLGVENVLQLFTCALLEIQILLYSQHYQRLMTVAESITALMFPFQWQHVYVPILPASLL
HFLDAPVPYLMGLHSNGEGDRTKLELPQEANLCFVDIDNHFIELPEDLPLFPNKLEFIQE
ISEVLLAFGVSPEGNPLHSQGQAKHRGFRSTDMVTDRRNGNLASSPLNSYLLRENETIAR
LQALVKRTGVSLEKLDVREDASSNKDLKVQCDEEELKMHQLNIQVREVFANRFTQMFADY
EVFVIQPSQDKESWFSNRDQMQNFDKASFLSDQPEPYLPFLSRFLETQMFASFIDSKILC
HDDEDKEHTLRVFDSRVDKMRMLNVRTPTLRTSMYQTCTNIDEAEKAIEMRVVKIDHTAL
HPHLLDMKIGQGRYEHGFFPRLQSDVLSTGPVSNKWAKRSAPAQWRRKDRQKQHAEHLYL
DNDQREKYIQEARNLGTTIRQPKLSNLSPSVIAQTNWKFVEGLLKECRNKTKRMLVEKMG
REAVELGHGEVSITGVEENTLIASLCDLLERIWSHGLQVKQGKSALWSHLLHYQESKEKT
DAAPAGLGPPGLIHDIERRKSDAGAALAPLKVSLIRDMRHIQNIGEIKTDVGKARAWVRL
SMEKKLLSRHLKKLLSDHELTKKLYKRYAFLRCDDEKEQFLYHLLSFNAVDYFCFTNVFT
TIMIPYHVLVIPSKKLGGSMFTANPWVCVSGELAETGVLQVPKHTQEITFECQNLGKLTT
VQMGHDNSGLYAKWLVEYVMVRNEITGHAYKFPCGRWLGKGVDDGSLERVLVGELVTPNS
ENEDRMCRTPPMQQSPGMMRRFVTISPNSKPKLNTSQIQEGVGEAINGIVKHFHKPEKER
GSLTLLLCGEYGLVWALEQVFQHGFKSPRLFKNVFIWDFLEKSQVYFESAEQREVTPEEN
WQTRVRHFCRFMRAINSTSRNIGKDGKFQMLVCLGARDHLLHHWIALLTDCPITVQMYED
TALIKDRSLVNSLIRVLQTLQEFNITLEASLVKGIGI
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccggcttcagctcgaattcatgtcgattcgcagattattttgttatctgcgga
cttgacactgaaagcgggcttgaaccagatgaactgtccgctttatgccagtatatagag
gctactaaattcagagatggggccagaggattggcgagtgcagatgaaggtgagaatttt
gagcagagtccactgcggagaacctttaaatccaaagttctagctcactacccagagaat
gtggagtggagtccctttgaccaggatgccgttggcatgctgtgtatgccaaagggtctg
gccttccgcacgcaggcggacacacgtgagcctcagttccactccttcatcatcactcgg
gaggatggctcgcggacgtacggctttgccctcactttctacgaggaggtgaccagcaag
cagatctgcagcgccatgcagaccctgtaccacatgcacaatgctgaacaatacgacatc
ctgcacacccccaccaccccgcggtgccccgaggaccagcgccacctccaaccccaccct
ctcaacccccacccccaacacacgctcctccccacgccctccatctcccggctgcagcgc
ttcaactcctacgacatcagccgcgacacgctctacgtgtccaagtgcatctgcctcatc
gcgcccatggcctttccccaggcctgcaggaaggtgctccagcagctccaccaggccgtc
tcctccccccagcccccacccctccccttggagagctatgtctacaacatcctgtacgag
gtgcccctgccccccgctgggcgctccctgaagttctcgggggtgtatgggccagtggtg
tgccagaggcccagcacggcagagctgcctctctttgacttccctatcagccaggtgttt
gagctgctgggggtggagaacgtcctccagctgtttacctgtgccctgttggagatccag
atcctgctctactcacagcactaccagaggctgatgactgtggccgagagcatcacagcc
ttaatgttccctttccagtggcagcatgtctatgtgcccatcctgcccgcctcactgctg
cacttcctggatgccccagtgccctacctgatgggcctgcactccaacggagagggtgac
cgcaccaaactagagctgccccaggaggccaacttgtgtttcgtggacatcgacaaccac
ttcattgagctgccagaggacctccctctgttccccaacaagctagagttcatccaggag
atctctgaggtgctgttggccttcggtgtgtctccggaggggaacccgctccacagccag
ggccaggccaaacaccggggcttccgctccactgacatggttacggacagacgcaacggc
aacctggccagctcgcccctcaactcctacctgctgagggagaacgagaccatcgctaga
ctgcaggccctggtcaagaggactggggtcagcctggagaagttggatgtgagggaggat
gccagcagcaacaaggacctgaaggtgcagtgtgatgaggaggagctgaagatgcaccag
ctcaacatccaggtgcgagaggtcttcgccaaccgcttcacccagatgttcgccgactat
gaggtgtttgtcatccagcccagtcaggacaaggagtcctggttcagcaacagggaccag
atgcagaactttgacaaggcctccttcctctctgaccagcctgagccctatctgcccttc
ctgtcccgtttcctggagactcagatgttcgcctccttcatcgatagtaagatcctttgc
catgatgatgaggacaaggaacacacgttgagggtgtttgactcccgcgtggacaaaatg
cgcatgctgaacgtgcgcacgcccaccctgcgcacctccatgtaccagacctgcaccaat
atcgacgaggcagagaaggccatagagatgcgggtggttaagatcgaccacacggccctg
catccccacctgctggatatgaagattggccagggtcgctacgaacacggcttcttcccc
cggctgcagtctgacgtgctctccactggacccgtcagcaacaaatgggcgaagaggagt
gctccagcacagtggaggaggaaggacagacagaaacaacacgctgaacacctttacctg
gacaacgaccagagagagaaatacatccaggaggccaggaacctgggcactaccatccgg
cagcccaagctgtccaacctctccccctccgtcatcgctcagaccaactggaagtttgtg
gagggtctgctgaaggagtgcaggaataagaccaagcgcatgctggttgagaagatgggt
agggaggcggtggagctgggtcatggggaggtcagcattacaggcgtggaggagaacaca
cttatcgcatccctctgtgacctgctggagaggatctggagccacgggctgcaggtcaaa
cagggtaaatctgccttgtggtcccacctgctccattatcaggagagcaaagagaagacg
gatgcagcaccagccggtttgggtcccccaggtctcatccacgacatagagagacgcaaa
tctgacgctggcgctgccttggcccctctcaaggtatccctgatcagggacatgagacac
atccagaatattggggagatcaagacagacgtgggcaaggccagggcctgggtgaggctc
tccatggagaagaaactgctgtccaggcacctcaaaaagctgctgtctgaccatgaactt
acaaagaaactatacaagcgttatgcttttctgcgctgtgacgatgagaaagagcagttc
ctgtaccacctcctctccttcaatgctgtggactacttctgtttcaccaatgtcttcaca
actatcatgatcccataccatgtgctggtgattcccagtaagaaactaggaggctccatg
ttcacagccaacccctgggtgtgtgtgtctggggagctggctgagaccggggtgctccag
gtccccaagcacactcaggagatcacctttgagtgccagaacctgggcaagctgaccaca
gtgcagatgggccatgataactccggtctttatgccaagtggcttgtggagtatgttatg
gtccggaatgagatcacaggtcatgcttacaagttcccgtgtggccggtggctggggaag
ggggtggacgatggcagtctggagagggtcctggtgggagagctagtgacaccaaactca
gagaatgaggacagaatgtgtcgcacgccccccatgcagcagtcccctggaatgatgaga
aggttcgtcaccatctcaccaaacagcaaaccaaagttgaacactagtcagatccaagaa
ggagtgggagaggccatcaatgggatagtgaagcacttccacaagccagagaaggagagg
ggcagtctgacccttctgctgtgtggggagtatggtctagtctgggctttagagcaggtg
ttccagcatggcttcaaatccccacgcctctttaagaatgtcttcatctgggatttctta
gaaaagtcacaagtgtactttgagagtgctgagcagagggaggtgactccagaggagaac
tggcaaaccagagtacgccacttctgtcgcttcatgcgggccatcaacagcacatctagg
aacataggcaaggatgggaagttccagatgctggtgtgtctgggtgccagggaccatttg
ttacaccactggatcgctctcctcacagactgtccaatcacagtccaaatgtacgaggac
acagcactgataaaggaccgctcattggtaaattctctgatcagagtgctacagactttg
caggagttcaacattaccctagaagcttcacttgtcaaagggatcggtatctag
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