Oncorhynchus tshawytscha (Chinook salmon): 112236240
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Entry
112236240 CDS
T05605
Name
(RefSeq) calpain-2 catalytic subunit-like
KO
K03853
calpain-2 [EC:
3.4.22.53
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04141
Protein processing in endoplasmic reticulum
otw04210
Apoptosis
otw04217
Necroptosis
otw04218
Cellular senescence
otw04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112236240
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
112236240
04217 Necroptosis
112236240
04218 Cellular senescence
112236240
09144 Cellular community - eukaryotes
04510 Focal adhesion
112236240
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otw01002
]
112236240
Enzymes [BR:
otw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.53 calpain-2
112236240
Peptidases and inhibitors [BR:
otw01002
]
Cysteine peptidases
Family C2: calpain family
112236240
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_8
EF-hand_7
DUF6553
Motif
Other DBs
NCBI-GeneID:
112236240
NCBI-ProteinID:
XP_042161570
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All DBs
Position
LG24:complement(28912571..28957775)
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AA seq
699 aa
AA seq
DB search
MAGVASTLAKKRALAAGFGTNANASKYLNQDFQSLRSECLRKGSIFTDCTFPAAPESLGF
KELGPNTSKTRGVQWKRPGELVSNPEFIVGGATRTDICQGGLGDCWLLAAIASLTLNEDV
MARVVPEGQGFGRGEYAGIFHFQFWQFGEWVDVVIDDRLPTKDGKLLFVHSAEGSEFWSA
LLEKAYAKVNGCYEALSGGSTTEGFEDFTGGIAENYDLKKAPSDLFQIIRKALASGALLG
CSIDITSQADSEAVTYQKLVKGHAYSLTGAMEVNYRGRKEKLVRVRNPWGTVEWTGAWSD
NSSEWNSVDFSERDVVKADDGEFWMSYTDFMKNYHRLEICTLTPDTLTSDDTKQWSVTNY
DGAWRKGSTAGGCRNNAHTFWMNPQFKINLEEEDDDPGDNEVGCSFVVGLIQKNRRRMRK
VGEDMHTIGFAIYEVPQQFHGQREVHLDKNYFLTHAQKARSETFVNLREVSTRFKLPPGE
YLIVPSTFEADLNGDFCLRVFSEKQAQFHHCEDRVEAKLDNDTVSEAEVDAGFRGLFAKL
AGKDMEISAAELQSILNKIIAKRTDIKTDGFSLETARVMVNLMDDNGNGQLGLGEFATLW
KKIQKYLSIYKKNDMDSSGTMSTPEMRMALKDAGFSLNNAIHQILVVRYGEADMTIDFDN
FVACIMRLEMMFKVFMKIDMANTGSIELDIHQWLSFTMI
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggctggtgtggcatctacgttggccaagaagagggcattggccgctgggtttggcact
aatgccaacgcgtcaaagtacctaaaccaagacttccaatctctcaggagcgagtgtctg
agaaaaggttcaatatttaccgattgcacttttccagctgcacctgagtcgctcggattc
aaagagcttggcccgaatacttccaaaaccagaggtgtgcaatggaagcgacctggggaa
ctggtgtccaacccagaattcatcgttggtggagccacgagaaccgacatctgccaagga
ggtctgggtgactgctggctcctggcagccatcgcctctctgaccctgaatgaagatgtg
atggcccgggtcgttcctgaaggacaaggatttggacgtggagagtacgctgggatcttt
cacttccagttctggcagtttggtgagtgggtggacgtggtgattgacgaccggctgcca
acgaaggatggaaagctgctgtttgttcactcagccgagggctctgagttctggagcgcc
ctgctggagaaggcctacgccaaggtgaatggatgctatgaggctctttcaggtggctcc
accactgagggctttgaggacttcacaggagggatagcagagaactatgacctgaagaag
gctccctccgacctgttccagatcatcaggaaagccctggcctctggagctctgctgggc
tgctccatcgacatcaccagtcaagcagactcagaggctgtcacctatcagaagctggtg
aaaggacacgcctactctctgaccggggctatggaggtgaactaccgtggccgcaaggag
aagctggtcagagtgcgtaacccctggggaacagtggagtggactggggcctggagtgac
aactcctcggagtggaacagcgttgatttttctgagcgtgacgttgtgaaagcagacgat
ggagagttctggatgtcgtacacggacttcatgaagaattaccatcgtctggagatctgc
actctgacccctgacaccctgacctccgatgatacaaaacaatggagtgtgaccaactac
gacggggcctggaggaaaggatcgaccgcaggaggatgcaggaataatgcccacacgttc
tggatgaatccccagttcaagatcaatctggaggaagaggatgacgacccgggggataat
gaggtgggctgtagcttcgtggtgggactcatccagaagaacagaagacggatgaggaaa
gtaggagaggacatgcacaccatcggattcgccatctatgaggtaccacaacagttccac
ggccagagggaggtccacctggataagaactatttcctgacccatgcccagaaggcccgc
tctgagaccttcgtcaacctgagagaggtcagcacccgcttcaaactgccccctggagag
tacctcatcgtcccctccaccttcgaggccgacctgaacggggacttctgcctacgagtg
ttctcagagaaacaggcccaatttcaccactgcgaagaccgtgtagaggctaaactagac
aatgacactgtgtctgaagcagaggttgatgctgggttcagaggtctgttcgcaaagcta
gctggaaaagacatggagatttcagcagctgagctccagtcgattctcaacaaaatcatc
gctaaacgaacggacataaagacggacggcttcagcctggaaacagccagagtcatggtc
aacctcatggacgacaacggtaacggacaactggggctgggagaatttgcgacactgtgg
aagaagatccagaaatacttgtccatttataagaagaatgacatggatagctctggcacc
atgagtacccctgaaatgaggatggccttgaaggatgcaggtttcagtctgaacaacgcc
atccaccagattctggttgttcggtatggagaggctgacatgaccatcgactttgataac
tttgtcgcctgcatcatgcggttggagatgatgttcaaagtcttcatgaagattgacatg
gctaatactggctctattgaattggatatccatcagtggttgtcatttaccatgatctag
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