Oncorhynchus tshawytscha (Chinook salmon): 112236291
Help
Entry
112236291 CDS
T05605
Name
(RefSeq) membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2-like isoform X1
KO
K05629
atrophin-1 interacting protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
MAGI_u1
PDZ_2
WW
Guanylate_kin
DUF6288
Motif
Other DBs
NCBI-GeneID:
112236291
NCBI-ProteinID:
XP_042153865
UniProt:
A0AAZ3QLY0
LinkDB
All DBs
Position
LG15:3560004..3848296
Genome browser
AA seq
1588 aa
AA seq
DB search
MSKSLKKKNHWTNKVYESVLCRNKEGELGFELKGGAENGQFPYLGEVRQGKVACQSGRLS
QDELLLEVNETPVAGLTIRDVHAVVRHSKDPVRLKCVKQGGVIDKDLRHYLNLRFQKASV
DHELQQIIRDNLYLRTIPCTTRQPKEGEVPGVDYNFVTVDRFMELEKSGALLESGTYEEN
YYGTPKPPCEPSPLLLNVTDQLLPGARPSSKGKRKRNKSVSNMEKAGIEPPEDEEEERPV
VNGNGNGITPESSEHEDKSTDVSSGDVPTQTCPPTDTPTTPNNEVPQEEGGELAKSPPKP
DENESELGPLPENWEMAYTEKGEVYFIDHNTKTTSWLDPRLAKKAKPPEECKEDELPYGW
EKIDDPIYGSYYVDHINRRTQFENPVLEAKRRVQQHQQMQEQGLSSLPLPTIYREKPLFT
RDATQLKGSFLSTALQKSNMGFGFTIIGGDEPDEFLQVKSVIPDGPAAQDGKMDTGDVIV
YINDVCVLGTTHADVVKLFQSVPIGQSVTLVLCRGYQLPYDPEDPGASAGTTTTLLSPLG
LMEQRPLLVNGRSNYDSYMDYISRTARFVQEHGDQHLNAHHHHQPPPLPHPGDTHLDGSS
LTPGGLHGEDSVSMASSGATQAELLTLTMVKGAEGFGFTIADSPTGQRVKQVLEPQGCPG
LCEGDLIVDINQQGVQGLSHTQVVELLKECAVGAETSLVIQRGGGGHYSPWKTPKQVLEQ
WDAAQGQGGGQGSPQTSLSAPVVPHNAPFLTRHLHRASVPDSALPEGFDLSRPDPYDLYE
KSRAIYESSRQPGLPRTIFSVDHSGAEYQEVEVHLRRQKSGFGFRILGGDEAGQPVSPDT
REKILIGAIIEKSPADRDGRLRPGDELIFVDGIPVAGKPHRYVIDLMHGAARNGQVNLTI
RRRLQGPGEPCPENGRSPGSVSTQHSSPRSDFTNVTYPGNNAAPPTDAMGTGSTTDGEPT
SSVQQPPSDVIIHRKESEGFGFVIISSLNRPETAAAISVPHKIGRIIDGSPADRCGKLKV
GDRILAVNSQSIINMPHADIVKLIKDAGLSVTLRIIPQEELSPSAPSSEKQSPAVTQQHS
PQAQPSPALGQPSPAVTQPSPAVTQPSPAVTQPSSLTHQSPITQTPAPPPQIYTHDSSYR
SEVKARQDVKPDIRQPPFTDYRQPPLDYRHPPVADYRQPPTLDYRHPPLMDYRQLSTDPR
HFPMPVPHDYRQIQPQMPQVYQDFDFFTVELEKSVKGFGFSIRGGREYKMDLFVLRLAED
GPAIRNGRMRVGDQIIEINGDTTRDMTHARAIELIKSGGRRVRLLLKRGTGQVPEYDSTS
PWDARPSASPSLSEVALPPDTLTMPSPSSHLTPSQQPPGPDLARLPPQEVPREPAVQESR
KADRSQSPRKAQTEPQNPDQTGHGRRDRDRPSGSGCSNGRAKQKEGGRSTRRGSCPKEGG
PVGRDELLPGGGEPKSSSRGRSKERIAGESSSTSQGKREPTQSPTKGSKPSYTNSNGNGS
SGGGTQSGSSSHPDVSVGHQGEPAQEKPRPREAERGPGETRPCRPNKSTSSGSTAVGRKA
TVSPGPWKIPGSDKLPSTLRSGTSTVSR
NT seq
4767 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaagcctgaagaagaaaaaccactggaccaacaaagtctatgagagtgtcctt
tgcaggaataaggaaggggagcttgggttcgagttgaagggaggcgcggagaatggacag
ttcccttatcttggggaggttaggcaaggcaaggtggcctgccagagcggcagactgtcc
caagatgaactactccttgaggtcaatgaaacgccagtggccggactaaccatcagggac
gtacatgcagtggtcagacacagcaaagaccctgtccgccttaagtgtgtcaaacaaggg
ggcgtcatagacaaggacctgcgtcactacctcaacctgcgcttccagaaggcctcagtg
gaccacgagctccagcagatcattagagacaacctctacctccgcaccataccctgcaca
accaggcagcccaaggaaggagaggtcccgggggtggactacaactttgtgactgttgat
cggtttatggaattggagaaaagtggagccttactagagagcggaacttatgaagagaac
tattacggtacccccaagcccccgtgcgagcccagccctctgctgctaaatgtaacagat
cagctcctgccgggcgcccgacccagctccaaggggaagaggaaacggaacaagtcggtc
agcaacatggagaaggccggcatcgagccacccgaggatgaggaagaggagaggcccgtt
gtcaatggcaacggcaatggcatcaccccagagtccagtgaacatgaagacaagagtaca
gatgtctcctcgggggacgtccccacccagacctgtccccccaccgatacccccaccacc
cctaacaacgaggtcccccaggaggaggggggcgagctagccaagtcgccccccaagcca
gatgagaatgagagtgagcttggccccctgccagagaactgggagatggcctacacagag
aagggagaggtgtactttatcgaccacaacaccaagacgacgtcgtggctggacccgcgg
ctggcgaagaaggcgaagccaccagaagaatgcaaagaggacgagctgccgtatggctgg
gagaagatcgatgaccctatttacggaagctactatgtggaccacataaacagacggaca
cagtttgagaacccagtcttggaagccaagaggagagtccagcaacaccaacaaatgcaa
gagcagggtctgtcctcgctgcccctacctactatctacagagagaagcccctgttcact
cgggacgccacccagctgaagggcagcttcctgtccacggccctgcagaagagcaacatg
ggttttggcttcaccatcatcggaggagacgagccagatgagttcctgcaggttaagagt
gtcatacctgacggccccgctgcacaggatggaaagatggacacaggtgatgtcatcgtg
tacatcaatgacgtttgtgtcctgggcaccacccatgccgacgtggtcaagctgttccag
tcagtgcccatcgggcagagcgtaaccctggtgctgtgccgtggctaccagctgccctac
gaccccgaggacccgggcgccagcgccggcaccaccaccaccctcctctcccccctgggc
ctgatggagcagcgccccctcctggtcaatggacgctccaactacgacagctacatggac
tacatctcgcgcacggcacgtttcgtccaggagcacggtgaccaacatctcaacgcccac
caccaccatcaaccccctccactgccgcaccccggcgacacccacctggacggctcctcc
ctgacgcccggcgggctgcacggcgaggactcggtgtccatggcgtcatcgggggcgacg
caggcggagctgctgacgctgaccatggtgaagggggcggaagggttcgggttcaccatc
gcagacagcccgacgggccagagggtgaagcaggtgctggagccccaggggtgtcctggt
ctgtgtgagggggacctgatcgtagacattaaccagcagggagtgcagggcctcagtcac
acccaggtggtggagctgctcaaggagtgtgccgtcggggctgagaccagcctggtcatc
cagaggggtggaggaggtcactattcaccctggaagacccctaaacaggtgttggagcag
tgggacgcggcccaaggccagggggggggtcagggcagcccccagaccagtctgtctgcc
cccgttgtcccccacaacgcccccttcctgacccgccacctccacagggcctcagtccca
gactctgccctccccgagggctttgatctgagcaggcccgacccctatgacctctatgag
aagtccagggctatctatgagagtagtaggcagccaggcctgccacggaccatcttctct
gtggaccactctggggcagagtaccaggaggtggaggtccacctgaggaggcagaagtcc
ggcttcggcttccgcatccttgggggagacgaggcgggtcagcctgtgagtccggacacc
cgtgagaagattctgattggtgccatcatagagaagagccctgcagacagagacgggcgc
ctgcggccaggcgatgagctcatcttcgtggacgggatcccggtggcggggaagccccac
cgctacgtcatcgacctgatgcacggcgccgcccgcaatggacaagtcaacctcaccatc
aggaggaggctacagggcccaggagagccgtgtccagagaacggccgcagccccggctct
gtgtccacccagcacagctccccacgcagcgacttcaccaatgtcacgtatcctggcaac
aacgcagccccacccactgacgccatgggtacaggtagcaccacagacggagagccgacc
tccagcgtgcagcagccaccgagtgatgtcattatccaccgcaaggagagtgaagggttt
ggattcgtcatcatcagctcgctcaaccggcccgagaccgccgctgccatcagcgtgccc
cataagattgggcgtatcatcgacggcagcccggcggaccgctgtggcaaactgaaggtg
ggtgaccgcatcctggcggtgaacagccagtccatcatcaacatgccccacgccgacatc
gttaagctcatcaaggacgctggcctcagcgtcaccctccggatcataccacaggaagag
ctgagcccgtcagcccctagctcagagaagcagagcccagcagtgacccagcagcacagt
cctcaggcccagcccagtcccgccttgggccagcccagccctgctgtcacccagcccagc
cctgcagtcactcagcccagccctgcagtcacccagcccagctccctgacccatcagagc
cccatcacacagaccccagcccccccaccccagatctacacccacgacagcagttacagg
tcagaggtgaaagcgaggcaggatgtgaaaccggacatccgacagcctccattcacagac
tacagacagcccccgttggactacagacaccctcctgtagcagactaccgccagccaccc
accctggactacagacaccctcctctgatggactacagacagctgtccactgaccccagg
cacttccctatgcctgtgccccacgactacagacagatccagccacagatgccacaggtc
taccaggactttgacttcttcaccgtggagctggagaagagtgtgaaggggtttggcttc
agtatccgtggagggagggagtacaagatggacctgtttgtcctgcgactggccgaggat
ggacccgccatccgcaacgggaggatgagggtaggggaccagatcattgagatcaatggg
gacaccaccagggacatgacccacgcccgggccatcgagctcatcaagtcagggggccgg
cgggtgcgtctgctcctgaagagaggcacagggcaggtcccagagtatgacagtacctcc
ccctgggatgcacgcccttcagcctccccaagtctgtcggaagtagccctgcccccagac
actctgaccatgccatcgccctcatctcatctgaccccgtcccagcagcccccaggcccc
gacctggctcgcctgccaccgcaggaggtcccgcgggagccggcggtgcaagagagcagg
aaggcggatcgctcccagagcccccggaaggcccagaccgagccgcaaaatccggaccag
accggccacgggaggagggaccgggaccggcccagtgggagtggttgcagtaatgggagg
gccaagcagaaggaaggtggcaggtccacccgcagagggagctgccccaaagagggaggg
ccggtggggagggatgagctgctacctgggggaggggagcccaaaagctcctccaggggg
aggtctaaggagaggatagctggggagagcagcagcacgtcccaggggaaaagagaaccc
acacagtccccgacgaaaggctccaagccctcatacacaaactctaacgggaacggcagc
agcggtggtggtactcagagcggcagcagcagtcacccagacgttagtgtcgggcatcag
ggggagccggcgcaggagaagcccaggcccagagaggcagagaggggccctggagagacc
cggccctgccgccccaacaagagcaccagcagcggcagcacggcagtgggtaggaaggcc
accgtgtcccctgggccctggaagatccccggctctgacaagctgcccagcaccctgcgc
tcgggcacgtccactgtgagcagataa
DBGET
integrated database retrieval system
