Oncorhynchus tshawytscha (Chinook salmon): 112236297
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Entry
112236297 CDS
T05605
Name
(RefSeq) nuclear receptor subfamily 5 group A member 2-like isoform X1
KO
K08027
nuclear receptor subfamily 5 group A member 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112236297
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
otw03310
]
112236297
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys4 Fushi tarazu-F1-like
112236297
Nuclear receptors [BR:
otw03310
]
5. Fushi tarazu-F1 like
5A. Fushi tarazu-F1 like receptor
112236297
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
112236297
NCBI-ProteinID:
XP_042178830
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Position
LG06:7696783..7833907
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AA seq
551 aa
AA seq
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MSSFSRDSESDQCGSTEDLTGAGGQPDGAESPAQPSGAVMLPKGDTESLVLVRSHGEQGH
MPRNMQAPHYKMMDYSYDEDLDEMCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYT
CIENQTCAIDKTQRKRCPYCRFQKCLTVGMKLEAVRADRMRGGRNKFGPMYKRDRALKQQ
KKALIRANGLKIESMTQVMQAVPTDLTISSAIQNIHQAASKGLPLSHHGLPHHAALPHTD
YDRSPFVTSPISMAMPPHTGSLQGYQAAYGHFQSTRTIKSEYPDPYSSSPESIMGYNPYM
DVYQTGSPPSFPHLIVELLKCEPDEPQVQTKILAYLQQEQASRGKHDKLNTFGLMCKMAD
QTLFSIVEWARSSIFFRELKVDDQMKLLQNCWSELLILDHIFRQVMHAKEGSILLVTGQQ
VDYAVIASQAGASLNNLMSHAQELVGKLRSLQLDQREFVCLKFLVLFSLDVKNLENFHLV
ESVQEQVNAVLLDYVMCNYPQQTDRFGQLLLRLPEIRAISLQAEEYLYYKHLNGDVPCNN
LLIEMLHAKRA
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccttcagccgtgacagtgaaagtgatcagtgtggctctacagaggacttgact
ggtgcaggtggtcagccggacggagctgagtctcccgctcagcccagtggagctgtcatg
ctgcccaaaggcgacacggaatctctagtactcgttcgatcgcatggagaacagggacac
atgccaagaaatatgcaagccccccactataaaatgatggactactcgtatgatgaagac
ttggatgagatgtgtccggtgtgtggagacaaggtttctggataccattacgggctcctc
acatgtgaaagctgcaagggcttcttcaagcgcacggttcagaacaacaaacggtacaca
tgcatagagaaccagacatgtgccatcgacaagacacaaagaaaacgctgcccttattgc
cgcttccagaagtgcctcactgttggcatgaagctggaagctgtgagggcggaccgcatg
cgtggcggccgcaacaagttcggccccatgtacaagcgcgaccgggccctcaagcagcag
aagaaagcgctgatccgcgccaacggcctgaagatcgagtccatgacccaggtgatgcag
gcggtgcccaccgacctcaccatctcctcggccatccagaacatccaccaggccgcctcc
aagggcctgccgctcagccaccacggcctcccgcaccacgccgccctgccccacacagac
tacgatcgcagccccttcgtgacgtctcccatcagcatggccatgcccccccacactggt
tccctccagggctaccaggcggcctacggccacttccagagcacccgcaccatcaagtcc
gagtacccggacccgtacagcagctcgcccgagtccatcatgggttacaacccgtacatg
gacgtgtaccagacgggctcgccgcccagcttcccacacctcatcgtggagctgctgaag
tgcgaacctgacgagccccaggtgcagaccaagatcctggcctacctgcagcaggagcag
gccagccgggggaaacacgacaaactcaacacgttcggccttatgtgcaagatggccgac
cagacgctgttctccatcgtggagtgggcccggagcagcatcttcttccgcgagctcaag
gtggacgaccaaatgaagctcctccagaactgttggagcgagctcctcatcctcgaccac
attttccgtcaggtgatgcacgccaaagagggctccatcctattggtcaccggccaacag
gtggattatgctgtaattgcctcccaagccggagcttctctaaacaacctgatgagccac
gctcaggagctggtgggcaagctgcgctccctgcagctggaccagagggagttcgtctgc
ctcaagttccttgttctgttcagcttggacgtgaagaacctggagaacttccacctggtg
gagagcgtccaggaacaagtgaacgcggtgctgctggactacgtcatgtgcaactacccc
cagcagacagacaggtttggccagctgctcctgcggctgcctgagatccgggccatcagc
ctccaggccgaggagtacctgtactacaagcacctgaacggagacgtgccctgcaacaac
ctgctcatcgagatgctacacgccaagagagcctga
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