Oncorhynchus tshawytscha (Chinook salmon): 112236343
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Entry
112236343 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: nucleolar transcription factor 1
KO
K09273
upstream-binding transcription factor
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112236343
03021 Transcription machinery [BR:
otw03021
]
112236343
Transcription factors [BR:
otw03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
112236343
Transcription machinery [BR:
otw03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
112236343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_5
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
112236343
NCBI-ProteinID:
XP_042173116
LinkDB
All DBs
Position
Unknown
AA seq
776 aa
AA seq
DB search
MTHPRHTATKPGLPRVQQQLKENSGWIEPFSRLKKVQMNGEMDTSTKDQVWTQDDLLNLL
EAMKVNLPQKDLAKYKTSESHLDWEKVAFNSFTGEMCKQKWNEVSKVIRKFRTLTELIFD
AQDFIKNPYKGKKLKKHPDFPKKPLTPYFRFFIEKRAKYAKLHPEMSNLDLTKILSMKYR
GLPDKKKKKYLEDFQKDKETFGHSMSKFREDHPDLMESMAKKGSNVPEKPRTPQQLWYSH
EKKAFLKTHADATTKDIKDSLGKQWTQLSDKKRLKWIAKSLEMHKAYEEVMKGFIETHPE
LNMSNEDIVKSTLTKAERHLKDKSDGRPDKPPGMDYSMFCAELMSSMKDVPSTERMVMCS
QVRLLKQXTEDGYQKRCEQRKKEYEVEMNRFLCSISEEEQQRVLGEQKMIGFKKGSGGSK
KKSRAKPSPEKPKRPISAMFIFSEEKRPKLQQERPDLSDSELTRLLARMWNELSDKKKEK
YKRLETVLKAESVKKGQEERSRLPDTPKTAQDIWQQSVIGDYLARFKNDRPKAQKAMEAT
WNTMEKKEKIMWIKKAAEDQKRYERELSEMRSPATIIASGKKMKFDGEPKKPPSNGYQKF
SQEMLSNGELNHLPMKERMGEIGGRWQRQPQKEKDRYKKIAEEKQKLYKVELERWLASLS
SQERNVYKEYNSQKRKTPVKPGGTAAKVKAKVIKKSDTEDDDDEEEEKEAASSDNDSSSA
EDSEEEDDDDDSFQTCNEEDDDDDDDDEAEDKENKSEGSSSSSDSSSVETSDSDSD
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgacccatcctcgccacacggctacaaaacctggtttaccccgtgttcaacaacagctg
aaagaaaattcagggtggatagaaccgttttcacggttaaagaaagtacagatgaatgga
gaaatggacacgtccactaaagaccaagtgtggacgcaggacgaccttctgaatctgcta
gaggccatgaaagtcaatcttccccaaaaggacctggccaagtacaagacgtcggagtcc
catctggactgggagaaggtggccttcaactcattcacaggagagatgtgcaaacagaag
tggaacgaagtctccaaagtgatccgtaaatttcgcacattaacagagctgattttcgat
gcccaagacttcatcaagaacccgtataagggcaagaagctgaagaagcatccagatttc
cctaagaagcccctgacgccatatttccgcttcttcattgagaagagggccaagtatgcc
aagctgcaccctgagatgagcaacctagacctcaccaagatcctctccatgaagtacaga
gggctgcctgacaaaaagaagaaaaaatatctagaagacttccagaaagacaaagaaacg
tttgggcacagcatgtcaaagttcagggaggaccatcccgacctgatggagagcatggca
aagaaaggttctaatgtaccagagaaaccaaggacgcctcagcagctatggtacagtcac
gagaagaaggccttcctcaaaacacacgcagacgcgaccaccaaagacattaaagacagt
cttgggaagcagtggacacagctgtcagacaaaaagagactcaagtggattgccaagtcc
ctggagatgcacaaagcatatgaggaggtgatgaagggcttcattgagactcacccagag
ctcaacatgagcaacgaggacatcgtcaagtccaccctcaccaaggctgagagacatctg
aaggacaaatctgatggcaggccagacaaaccaccgggaatggattactccatgttctgt
gctgagttgatgtctagtatgaaggacgtgcccagtacagagcgcatggtcatgtgcagc
caggtgaggctgctgaaacagnaaacggaggacggctaccagaaacgctgcgagcagaga
aagaaagaatacgaagtcgagatgaaccggtttctttgtagtatatcagaggaggagcag
cagcgtgtgctgggggagcagaagatgattggctttaagaagggcagcgggggcagcaaa
aagaagagcagagcgaagcctagcccagagaagcccaaaaggcccatctcggccatgttc
atcttctctgaagagaaacgtcccaagctgcagcaagagcgaccagacctgtctgacagt
gagctcaccaggctgctggcacgcatgtggaacgagctctcagataagaagaaggagaag
tacaagcgccttgagacggtcctgaaggccgagtctgtgaagaaaggacaagaggagcgc
agccggctgccagacacccccaagactgcacaggacatctggcagcagagtgtcatagga
gactacctggccaggttcaagaacgaccggccaaaagcccagaaagccatggaagccact
tggaacaccatggagaagaaggagaagatcatgtggattaagaaggcagctgaggaccag
aaacgatacgagagggagctgagtgagatgcgctctcctgcaaccatcattgcctcaggg
aagaagatgaaatttgacggtgaacccaagaaacccccttcgaatggctaccagaagttc
tctcaggagatgctgtccaacggagagctgaaccacctccctatgaaggagcgcatgggg
gagatcgggggtcgctggcagaggcagccccagaaggagaaggaccgctacaaaaagatc
gctgaggagaaacagaagctgtacaaagtagagctggagcggtggctggcgagcttgtcc
tcacaagaaagaaatgtgtacaaggagtacaactcgcaaaaaagaaaaaccccagtgaaa
ccaggaggcactgcagccaaagttaaggccaaggtaatcaagaagtcggacacagaggat
gatgatgacgaggaggaagagaaggaggctgcctcatcagataacgattcttccagtgca
gaggacagtgaggaggaagatgatgatgatgatagttttcagacttgtaatgaggaagac
gacgatgatgacgatgatgatgaggcggaggataaagagaacaagtcagaggggagtagt
agcagcagtgactcgagctcagtggagacatcggactctgattcagactga
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