Oncorhynchus tshawytscha (Chinook salmon): 112236349
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Entry
112236349 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: transmembrane and ubiquitin-like domain-containing protein 1
KO
K23340
transmembrane and ubiquitin-like domain-containing protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112236349
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
ERAD complex
112236349
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ubiquitin
NrsF
Pox_Ag35
Rad60-SLD_2
Ubiquitin_TPR1
Motif
Other DBs
NCBI-GeneID:
112236349
NCBI-ProteinID:
XP_042163248
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All DBs
Position
LG27:complement(19616131..19621010)
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AA seq
308 aa
AA seq
DB search
MAVCALTMDGMGDEVAAVSGVLLLVLALVLAWLSTQVADXGDHILSTILTVGAHASLIGL
GGHESYSGGPPSADTPEQQTPPPSQENKPEEGEPGSEREDGEITGEGTAGAGVDLLLNIQ
GKKPQTYQPDDDEDDEEEDDYEEEDKVQKLSPVVSCTSITVRLKFLNDTEEVAVLSPQDT
VGLLKSKHFSGRERQIKLIYQGQLLQDPKRTLLSLNISHNSVIHCHVSQVLREASPEEAA
RSGASAGIRAAGLALSTSSLVVPVFVVMLAVVWYFRINYRQFFTAPATISLVGVTVFFSF
LIFGMHSR
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtgtgcactgacaatggacgggatgggagacgaggtggctgcagtaagcggt
gtgttactcctggtcttggccttggtcctggcttggctctccacgcaagtggcagatncg
ggagaccacatcctgagcaccatccttacagtcggtgcccacgcctctctaatcgggctg
gggggccatgagagttacagtggagggccacccagtgcagacaccccagagcagcaaaca
cctccaccctcccaggagaacaagccagaggagggggagcctgggtctgagagggaagat
ggggagataacaggagaggggactgcaggggctggagttgacctgctgttgaatatccag
gggaagaaacctcagacataccagcctgatgatgatgaagatgatgaggaagaggatgac
tatgaggaagaagataaagttcagaagctgagcccagtggtctcctgcaccagcatcacg
gttcgtttgaagttcctgaatgacacagaagaggtggcagtcctgagtccccaggataca
gtgggtctactgaagagtaagcacttctcagggcgggagcgtcagatcaagttgatctac
cagggccagctgcttcaggatcccaaacggactctgctctccctcaacatctctcacaac
agtgtgatccactgccacgtgtcccaggtgctgcgggaggccagcccagaggaggcagct
cgctctggggctagtgcgggaatcagggctgcaggcctggctctaagcaccagcagcctg
gtggtgcctgtgtttgtggtgatgttagccgtggtctggtacttccgcatcaactaccgt
caattcttcaccgcccctgctaccatctccctggtgggagtcactgtgttcttcagcttc
ctcatctttggaatgcacagccggtga
DBGET
integrated database retrieval system
