Oncorhynchus tshawytscha (Chinook salmon): 112236365
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Entry
112236365 CDS
T05605
Symbol
psen1
Name
(RefSeq) presenilin-1
KO
K04505
presenilin 1 [EC:3.4.23.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04310
Wnt signaling pathway
otw04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
112236365 (psen1)
04330 Notch signaling pathway
112236365 (psen1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otw01002
]
112236365 (psen1)
Peptidases and inhibitors [BR:
otw01002
]
Aspartic peptidases
Family A22: presenilin family
112236365 (psen1)
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Gene cluster
GFIT
Motif
Pfam:
Presenilin
Oxidored_q3
Motif
Other DBs
NCBI-GeneID:
112236365
NCBI-ProteinID:
XP_042186296
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Position
LG11:complement(53917618..53958182)
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AA seq
469 aa
AA seq
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MANNGEDIENNMVTEAPVPTQNQHPEPGVTGVRSRGGGGGAEQNGQAPPQRTPQVVESEE
DEDEELTLKYGAKHVIMLFVPVTLCMVVVVATIKSVSFYTQNDGQRLIYTPFPEDTDTIG
QRALNSVLNATIMISVIIVMTMVLVLLYKYRCYRVIQGWLFLSSLLLLFFFSFIYLKEVF
KTYNVAMDWITLAVIVWNFGVVGMICIHWKGPLRLQQAYLIMISALMALVFIKYLPEWTA
WLILAVISVYDLLAVLCPKGPLRILVETAQERNEPIFPALIYSSTMVWLVNMADTGLGHR
PMTRKNSTEAPITQVESQSLALGPAPLSPPEDDGGFTPNWMGHQEHQLGPLQSTDETRRE
IQQLPSARPPVMDDDDEERGVKLGLGDFIFYSMLVGKASAAASGDWNTTLASFVAILIGL
CLTLLLLAIFKKALPALPISIFFGLVFYFATDNLVRPFMDQLALHQFYI
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaatggggaggatatcgagaacaacatggtgactgaggctccagtaccaacc
cagaaccagcaccctgagcctggggtgacgggggtgcggtccaggggtggagggggtggg
gcggaacagaacggacaggctcccccacaacgcaccccccaggtggtagagagtgaggaa
gacgaagatgaggagctgacgctgaagtacggggccaaacacgtcatcatgctgttcgtc
cctgtcacgctctgcatggtggtcgtcgtggcaaccatcaagtccgtcagcttctacacc
cagaacgatggacagagactgatatacaccccgttccccgaggacacagacacaataggg
cagcgagccctcaactcagtcctcaacgccaccatcatgatcagtgtcatcatagtcatg
accatggttctggtgctgctatacaagtaccgctgctacagggtgatccaaggctggctg
ttcctctcctctctactcctcctgttcttcttctccttcatatacctcaaagaagtgttc
aagacgtacaacgtggcgatggactggatcaccttggctgtgatcgtctggaacttcggg
gtggtagggatgatctgtatccactggaaggggcctctccgtctgcagcaggcctacctc
atcatgatctctgctctcatggctctggtcttcatcaagtaccttcctgagtggactgcc
tggctcatcctggccgttatatctgtctatgatctgctagcagtgctctgccccaaaggt
cctctacgtatcctagtggagacagctcaggagaggaacgaacccatcttccctgctctc
atctactcctcgaccatggtgtggctggtcaacatggcagacactggcctcggacacaga
ccaatgaccaggaagaactcaacagaggcccccatcactcaggttgagagtcaatccctg
gctctaggcccggcccctctcagccccccggaggatgacggagggttcacccctaactgg
atggggcatcaggagcatcagctgggaccccttcagtccacagacgagacccgacgggag
atccaacaactcccctctgccagaccacccgtaatggacgatgatgacgaggagagggga
gtgaagctgggtctaggagacttcatcttctacagcatgctggtggggaaggcctctgct
gcagctagtggagactggaacaccaccctggccagcttcgtagccatactcatcggcctg
tgtttgactcttcttctcctggccatctttaagaaggccctccctgcccttcccatctcc
atcttctttggcttggtgttctacttcgctacagacaacctggtcagaccttttatggac
cagctggctctgcaccagttctacatttag
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