Oncorhynchus tshawytscha (Chinook salmon): 112236369
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Entry
112236369 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: TBC1 domain family member 5
KO
K18469
TBC1 domain family member 5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112236369
Membrane trafficking [BR:
otw04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
112236369
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
DUF2981
Motif
Other DBs
NCBI-GeneID:
112236369
NCBI-ProteinID:
XP_024260719
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All DBs
Position
LG31:25162078..25209804
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AA seq
819 aa
AA seq
DB search
MQHPNFETHHPLQPEGEQEMGFDPLHNFNRNLSCGVSLDSSTLSESTFLSYRKEWDDLFL
NSNYLTRIRQAGINGRLRSSRFRSVCWKLYLEVLPEDKSQWINKTKELRSQYEKIKERHI
TNPRKAAGQQDLVVNNPLSQDEGSLWNKFFQDNELRGMIKQDVMRTFPEMRYFQEEDVRT
KLTDILFCYARENEQLLYKQGMHELLAPIVFVLHCDHQAFQHASETAHPSEEMMSLLNPM
FQEHDAYAMFSQLMETAEPWFSSFQREVRRGKEEMLTSMPFARPQDLGPSVAIVTKVNRI
QDQLVKKHDVELHMHVNRLEIAPQIYGIRWVRLLFGREFPLQDLLVVWDALFADSITLDL
VDYVFVAMLLYIRDALIASNFQTCLGLLMHYPPIGDIHTLLHKALFLRDPKNNPRPANYQ
FQQNLDYYKTRGADLVNSTRAKTAPLNINKVSSSLLSFGRKLIAPAISGGVASVISPINS
EIRSAPSPLTAAPRPQAEPLFSGHAPCRHXSQSQHQRLLKSESMPVYLSQGQTSRTVSSS
PSIESLSGGQGHTTASPPLPVSRGSDISTLSPPLSATKKDSFFNITRSHSKTMGKKEAEE
ELEAQVSFLQGQINDLEAMSKYCAKMMNTHIGRIQEVILQEHLEKEDEVLVSLAGLKQIK
DILKGALRFNQSLLETEENEEITIADDHYDHTSAAQQQHANSHHEDQPFLAAPQRGDGDG
EQEEEEREQTPPEQQASPPESSLCVGSEGRNWDDYILVSQDGELPPTGGGVERTPPIRQL
HGSVRVEPFQGAASGSSSPDEGSIHSKDSDFAMVNSQDL
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaccctaactttgagactcaccaccctctccagccagagggagagcaggagatg
ggttttgacccgctccacaacttcaacaggaatctcagctgtggagtatctctggatagt
agcactttgtctgagtccactttcctctcctacaggaaagaatgggatgacttgtttctg
aacagtaattacctgaccaggatccgtcaggcaggaatcaacggtcgattgcggagcagc
cgattccgcagtgtgtgctggaagttgtacctggaggtccttcctgaggataagagccaa
tggatcaacaagaccaaggagttacgatcccagtacgagaagatcaaagagagacacatc
accaacccccgtaaggctgcaggccagcaggacttggtggtcaacaacccactctcacag
gacgaggggagcctgtggaacaagttcttccaggacaacgagttgagagggatgatcaaa
caggatgttatgagaacgtttcctgagatgcgttacttccaagaggaggacgtaaggacc
aagctgacagacatcttgttttgttacgcccgagagaatgaacagttactgtacaaacag
ggaatgcatgagttgttggctcctattgtgttcgtcctacactgtgaccatcaggccttt
cagcacgccagcgagaccgcccaccccagtgaggagatgatgtctctactgaatcctatg
ttccaggagcatgatgcctatgccatgttttcccagctgatggagacagcagaaccctgg
ttctccagcttccagagggaagtcagaaggggaaaggaggaaatgctaaccagcatgccg
ttcgcccggccgcaagacttggggccgtccgttgccatagtaaccaaagtgaaccgcatc
caggaccagctggtgaaaaagcacgatgtggagctgcacatgcacgtcaaccgcctggag
atcgccccacagatatacggcattcgctgggtgcgtctgctgtttggccgtgagttcccc
ctgcaggacctgttggtggtgtgggatgccctgttcgctgacagcatcactctagacctg
gtggactatgtcttcgtagccatgctgctctacatcagagatgccttgatagcgagtaac
ttccagacctgtctgggccttctaatgcactacccacctataggagacatccacacccta
ctacacaaggctttgttcctccgagaccccaagaacaatcctcggccggccaactaccag
ttccaacagaatctggactattacaagaccagaggggcagacctggtcaacagcacccgt
gccaagacggctcctctcaacatcaacaaagtctccagcagcctgctcagctttgggagg
aagctcatcgccccagccatatcagggggtgttgccagcgttatctctccaatcaacagt
gagattcgttctgccccctcccccctcactgcagccccccgcccccaggccgagcccctg
ttctctggccacgccccctgcagacacnactcccagtcccagcaccagcgcctactgaag
tctgagagcatgccagtctacctgagccaaggccaaacctccaggacagttagctcctcc
cccagcatagagagtctctctgggggacagggtcacaccacagcgtccccgccccttccc
gtctccaggggaagtgacatcagcaccttgtccccacccctctcagccaccaagaaggac
tccttcttcaacatcactcgctcccacagcaagaccatgggcaagaaagaggccgaggag
gagttggaggcccaggtgtccttcctgcagggtcagatcaatgacctagaggccatgagc
aagtactgtgccaagatgatgaacacacacattggtaggatccaggaggtgatcctacag
gagcacctggagaaagaggatgaggtattggtgtcactggctggacttaaacagatcaag
gacatcctgaagggagctctgcgtttcaaccagagcctgctggagactgaggagaacgag
gagatcaccatcgctgacgaccactatgaccacacctctgccgcacagcagcagcacgcc
aacagtcaccatgaagaccagcctttcctggccgcaccacagcgtggcgacggtgatgga
gaacaggaggaagaagagcgggagcaaaccccaccagagcaacaggcttctcccccagag
tcctctctgtgtgtgggctcggaggggaggaactgggatgactacattctggtctcgcag
gacggagagctgccgcccaccgggggaggggtggagaggacccctccaatcagacagctc
cacggctcggtcagggtggagccgttccagggtgcagcatcgggttcctccagcccagac
gagggcagcattcacagcaaagactcagacttcgccatggtcaactcccaggacctgtga
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