Oncorhynchus tshawytscha (Chinook salmon): 112236383
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Entry
112236383 CDS
T05605
Symbol
stau2
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 2 isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
otw01009
]
112236383 (stau2)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112236383 (stau2)
Protein phosphatases and associated proteins [BR:
otw01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112236383 (stau2)
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
112236383 (stau2)
mRNA cycle factors
Stress granule specific factors
112236383 (stau2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
112236383
NCBI-ProteinID:
XP_042154619
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All DBs
Position
LG16:4011568..4319069
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AA seq
473 aa
AA seq
DB search
MKRGEPAIYRPLDPKPMPNYRANYNFRGMFNQRYHYPVPKIFYVQLSVGTNEFIGEGRTR
QAARHNAAMKALQALRNEPIPERPPQSPEEQKELDEGSDASKSEISLVYEIALKRNLSVC
FEVLKESGPPHMKSFLTRVSVGEFSAEGEGNSKKLSKKRAALSILQDLKKLPFTPLVEKP
KLHYKKRPKTILKTGPDYGQGMNPISRLAQIQQAKKEKEPEYLLLSERGMPRRREFIMQV
KVCGEVATGTGPNKKVAKRNAAEAMLLQLGYKASTCPQSPTEMDDKGWNGQKTAFNETTT
NTQKGLLHLSPDVYQEMEASRKQGAPVNYLTPKLSDPLVVPLSPGHTPYYSPPAVATAAM
ARELLMNGSGEGRSGENIGLKGKSSVQPSQQLEYLAQIQGFQVLYSDGQNGREFMTYLTL
SPVQMTFHGIGSSIEASHDQAALSALKQLSEQGLDTVDCPIKSSEVCVREDGH
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaggtgagccagccatctaccgtcccctggaccccaagcccatgcccaactac
agagccaactataacttcagaggcatgttcaaccaaaggtaccactacccagttccaaag
atcttctatgtccagttgtctgtgggcactaatgagtttattggagagggccggactcgc
caggcagcccgtcacaacgccgccatgaaggccctgcaagccctccgcaatgaacccata
cctgaacgaccacctcagagccctgaggagcagaaggagctggatgaggggagtgatgcc
tctaagtcagaaatcagtctggtttacgagatagccctcaagaggaacctgtctgtctgc
ttcgaggtcttgaaggaaagcggcccccctcacatgaagagcttcctgacccgtgtgtcc
gtgggggagttctcagcagagggcgaggggaacagtaagaagctgtctaagaagagggct
gctctctccattctccaggacctcaagaaactccccttcaccccgttagtggagaaaccc
aaactacactacaagaaacgccccaagaccatcctcaagacaggtcctgattatggccag
gggatgaaccccatcagtagactggctcagatacaacaggccaagaaggagaaggaacct
gaatacctcttgctgtctgagagaggcatgccccgacgcagggagttcatcatgcaggtg
aaggtgtgtggcgaggtagccacgggaacagggccaaataagaaggtggcgaagcggaat
gctgccgaggccatgctactgcagctgggatacaaggcctccacctgcccacagagccct
actgagatggacgacaaaggctggaacggacaaaaaacggcttttaacgaaactacgact
aacacccagaagggtctactccacctctccccggacgtctatcaagagatggaggcgagc
aggaaacagggggcccccgttaactacctaacccccaaactatctgatcccctggtcgtc
cctctgtcccctggacacaccccctactacagcccccccgcggttgccacggcagccatg
gcgagggagctgttgatgaacgggtcaggagaggggaggtctggggagaacataggactg
aaggggaagagctctgtccagccctcacagcaactagagtacctggctcaaatacaaggc
ttccaggtgctgtacagcgatggtcagaatggtagagagttcatgacctacctgacactc
tcacctgtacagatgactttccacggcatcgggagctccatcgaagccagccacgaccag
gctgctctaagtgccttgaaacagctgtcggaacagggactggacacggtggactgccct
atcaagagcagcgaggtgtgtgtcagagaggacggacactga
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