Oncorhynchus tshawytscha (Chinook salmon): 112236411
Help
Entry
112236411 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: DNA repair and recombination protein RAD54B-like
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
112236411
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
otw03400
]
112236411
DNA repair and recombination proteins [BR:
otw03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
112236411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
112236411
NCBI-ProteinID:
XP_042175276
LinkDB
All DBs
Position
Unknown
AA seq
935 aa
AA seq
DB search
MRRSGAPSQVFGNMAKKPRFVPPGASLAGPPDPPVGTLLEPEPLAPKLSPGNVLYKVQRS
LSAPAPPLALPVKAFSLVKSSPQAPGLPRALARVLGAADSKKNELEPEDPSFTEENTGDP
ADFRCSSQSPAGGCGPVGVGAGSGSGAGSDGPRYFSVMWCKASGRKHKRWQGDAVLVTRG
RTATLKDMEGKDIGTDSGYKVSELASLGEGETLMIGAKQVEVMGLISELNYNKGRCFLDV
HVEKVEPKISAPPPSQRPASKPFCRPTLLGGETDRGVAKPQEEGPCKPRHDPLAPGAIVM
PRPSTNHQWTYNKAGLPLVDVVVDPYLTSHLRPHQRDGLLFLYECVMGMRATCRYGAILA
DEMDLGKTLQSVALTWTLLKQGPYGGKPVAKLVLVVAPGSXEFKKWLGRERINVYTVNQD
HRVELFAASPLHSVLVISYEMLLRSLEVVQKLEFGLVICDEGHRLKNSSIKTSSALSSLS
CTRRVILTGTPVQNDLQEFYAIIEFVNLGILGSSAAYRKVYEEPILRSRQPICTEEERVL
GEERAAELSRLTGLFILRRTQEIINRYLPPRLDWTVFCSPSPLQRELYQALLSHRVIRAC
LQGSTQTHTHLACITALKKLCNHPGLLYSTVQERSDGGSAEISLYEGLRGVFPESYSSGG
FSTADSGKLLVLSDLLTTIHHLSSTDRVVLVSNYTQTLDLLQDLCVHLGYTYCRLDGNTP
TIQRQRLVDNFNSPHSAHFLFLLSSKAGGVGLNLIGASHLVLYDIDWNPANDIQAMSRVW
RDGQKKTVHIYRLLTAGTIEERIFQRQVSKQGLSGTVVDLGKGAEHTSFSSNELXDLFSL
TDTPCLTHDLLHCSCSMDGSAPEEGEDEAPASDRPCQLGRQGDRGGAGQKHLSMSELIQW
RHFTGDTHTFRDAYLDHARTHISFAFQSTISHTTQ
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgctcaggggcccccagccaggtctttggtaacatggcgaagaagccccggttc
gtccctcctggagcctccctggctggtcctcctgatccccctgtgggtactctgcttgaa
ccggagcctctggcccctaaactctccccgggaaacgtgctctacaaggtccagcggagc
ctctcagcccctgcaccgccgcttgccctgcctgtgaaggccttcagcctggttaagagc
agcccccaagccccaggcctgcccagagctctagccagggtgctaggtgcagcagacagt
aagaagaacgagctagagcctgaagacccttcctttacagaggagaacactggagaccca
gctgatttcagatgttcctcacagagtccggcaggaggctgtggtccagttggggtcggg
gcagggtctggtagcggtgctggttctgacgggccgcggtacttcagtgtgatgtggtgt
aaggccagtgggaggaaacacaaacgctggcagggagacgctgtcctggtgacacgaggg
cgcaccgccacgcttaaagacatggagggcaaggacatcggcacagatagtggctataag
gtatcagagctggcatcgctgggtgaaggagagaccttgatgataggagctaaacaggtg
gaggtgatgggactcatatcagagctgaactacaataagggccgctgtttccttgacgtc
catgtggagaaggtggagcctaagatatcagctcctcccccctcacaacgcccagcttcc
aaaccgttctgccgtccgacgctattgggcggagagactgataggggagtggccaagcct
caggaggaggggccctgtaaaccacgccatgaccctctagcaccaggagccattgtcatg
ccccggccctcaaccaatcaccagtggacgtataacaaggcaggcctcccactggtggac
gtggtggttgacccctacttgacctctcacctccgaccccaccagcgagacggcctgctg
ttcctctacgagtgtgtcatggggatgagggctacatgtaggtacggtgctatcctggca
gatgagatggatctgggtaagaccctccagagcgtggctttgacatggacgctgctaaag
cagggcccatacggcgggaagccggttgctaagcttgtgctggtggttgcccctggcagc
nnggagtttaagaagtggcttggccgtgagaggatcaacgtctacactgttaaccaggac
cacagggtggagctgtttgcagcatctcctctccacagtgtattagtgatcagctatgag
atgctgcttcgctctctggaagtggtacagaagctggagtttgggctggtgatctgtgat
gagggtcacaggttgaagaacagcagcatcaagacttcctctgccctcagcagtctcagc
tgtacacgcagagttattctgacaggtactcctgtccagaatgacctgcaggagttctat
gccatcatagagtttgtgaacctgggcattctggggtcgtctgctgcctacaggaaggtg
tacgaggagccaatcctccgctctcgacagcccatctgcactgaggaggagagagttttg
ggggaggagcgagcggctgagctctctcgtctgactggtctgtttattttgaggcggacc
caagagatcatcaaccgctacctgccgcctcgtcttgattggacagtgttctgtagcccc
tcccccttgcagcgggagctgtaccaggctctcctctcgcaccgtgtcatccgagcctgt
ctacaggggtcgacacagactcacacacacctcgcctgcatcaccgccctgaaaaagctc
tgcaaccacccaggactgctctactccactgtacaggagcgttctgatggcggctcagca
gagatttctctgtatgaagggctaagaggtgtctttccagagtcttactcttctgggggc
ttcagtacagctgactcagggaaactactggtcctgtctgacctactgaccactattcac
cacctcagctctactgacagggtggtgttggtgtccaactacactcagacgttagaccta
ctccaggacctgtgtgtccacctgggctacacctactgtcgcctggacggcaacaccccc
accatccagaggcagcgattggtggacaacttcaacagccctcactccgcccacttcctc
ttcctcctgagttctaaagccggaggggtggggcttaacctgatcggggcctcccacctg
gtcctatacgacatcgactggaaccctgccaacgatatacaggcaatgtcacgagtgtgg
agagacggacagaagaagactgttcacatctaccgcctgctcactgcaggtaccatagag
gagcgtatcttccagaggcaggtgtccaaacaggggctttctgggacagtggtggacttg
gggaaaggggcggagcacaccagcttctcctccaatgagctgtgagatctcttcagcctg
acggacacaccctgtctcactcacgacctgctacactgcagctgcagtatggacggatca
gccccggaagaaggagaggatgaggcacctgcgtctgataggccgtgccagctgggtcgt
caaggtgaccgtggtggggcggggcagaagcatctgagcatgtcagagctgatacagtgg
agacacttcacaggggacacacacaccttcagagatgcttacctggaccatgcacgaacc
cacatctccttcgccttccagtccaccatctcacacaccactcagtaa
DBGET
integrated database retrieval system
