Oncorhynchus tshawytscha (Chinook salmon): 112236413
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Entry
112236413 CDS
T05605
Name
(RefSeq) tyrosine-protein phosphatase non-receptor type 3 isoform X1
KO
K21111
band 4.1-like protein 4B
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112236413
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112236413
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Other domain-containing proteins
FERM domain-containing proteins
112236413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
FERM_M
FERM_C
FERM_N
PDZ
FA
PDZ_6
PTPlike_phytase
Y_phosphatase3
DSPc
PDZ_2
Motif
Other DBs
NCBI-GeneID:
112236413
NCBI-ProteinID:
XP_042162791
LinkDB
All DBs
Position
LG03:complement(376838..431115)
Genome browser
AA seq
1541 aa
AA seq
DB search
MPKPDLLCLVQLLDNTIQTFTVNKQDAGEVLLEQVCNQLGLQERHFFSLQLRDSNTTIVT
QTHSPRWLEANKPLKKQLKGVVSPFYLTLRVRFFISDPNSLQHDQTRHMYFLQIRSDIRE
GRLKCPLSAAVVLASYAVQSELGDYSPDLLPGYLSKSHFLPEQDDDFLSRVEALYPGHRG
LKQSEAELCFLNTARTLEMYGVELHTAMDSDSSPLLVGLASGGVAIFCNMICSSFFPWVN
IIKISFKRKRFLMQLRRKHGETQDCVVSLVLPCPRACKNLWRSCVDHHCFFYTNLATRSP
HHTNLATQIHNKLLPQHWALGSTKTDSGPVCKKVMGGMEWNPALRGSTSSEHLETKSLPS
RSPPLTPNWRSPRVRHGARKPRPSSVELNNDLRDVSEGEDVFYTYRVSLSSSRGSQEGTP
THSVSGTHSQGGGWSQVDDISTGEEDIKATSHYRDKRALGDGDLLLVRLAPDDDGKFGFN
VKGGVDQKMSLAISQVNPDSPAGRVEPRLLEGDQVVLINGRDISEHTHDQVVMFIRASRE
SHSRELALLIRRKGPGRVAPLLQFPSALSLTGQSHGDPLLLPGQSEQGQTLEESMKQLER
GIQTGTLTFHFENLYMRKPGLSVACARLPENTDKNRYKDVLPYDISRVVLQDQEDYINAS
HITVMPPGSGVCLRYIAAQGPLPQTCTHFWQSVWEQHTHTIIMLTTLTERGRTKCHQYWP
HPPEVRDYGYLRVSCHSEECNLAYVTRQFTLTHTQLREERSVTHLQYVAWPDHGVPDDPS
DFLLFITSVRERRTGDTPLMVHCSAGIGRTGVLITMETALSLLESGRPVVPLDIIRTLRD
QRAMMIQTTKRSKGQELFDQIRYHLDLVEADYFGLQFMDPEQVSHWLDVSKPIKKQIRDG
PPYRLFFRVKFYSSEPNNLHEEFTRYLFVLQLRQDILSGKLKCPYDVSVDLGAYCLQSEL
GDCDPLEHSPELVSEFRFTPKQSETMEADIFNKWVDLRGTDPSQAETSFLNKCKWLELYG
VDMHFVKGRDGAEYALGLTPTGILVFEGSTKIGLFFWPKITRLDFKKSRLTLVVTEDDDQ
GREQEHTFVFQLDSSKTCKHLWKCAVESHAFFRLRQPTAGKASSSDFTRLGSRFRFSGKT
EYQATHGGRLRRASTFERRPSKRYPSRTHSLGGKALSPAKPPHISAHTSPEPSLHPSFSP
SISVQYQRNIPIAHEPWHPALTPPIYLQHSGHTSPHSFPRRGPVLGGEQQFSVEENETPY
SGSIHHRHRRHTHYDSQETYCHTHKNKHRAPPCPVDELEVCLLNPLETDSNTSPWPSLHV
NMDNKAEEKQLSEKSLQPSSPCSPPDHLKCNIYKAQMEAVYRDAPLTPRGKTCSLEINDR
YQSSCQDSRDSATSSLTTEKTSLRPDHNSTTDRHAKSNPNTNRRKRLVRQFSFNHEDEDN
LPEALAAISSRSTGKCGSNNSLDNQTQPSIYPQETNTQMDMPILELRSPCRERSHSPHLS
PSFYHTSIPPLVPCLASHTNSEEEMRLGREKILRALLMTEL
NT seq
4626 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaacctgatctactgtgtttggttcaactactggacaacactatccagaccttt
acagtcaacaagcaggatgcaggtgaggttttgctggagcaggtgtgtaaccagctgggt
ctgcaggagagacacttcttcagtctgcagctacgagactccaacaccaccatcgtcact
caaacacactctcctaggtggctggaggccaacaaaccactgaagaagcagctgaaagga
gttgtctctccattctacctgaccctccgagtccgattcttcatctcagaccccaactct
ctacagcatgaccagaccagacatatgtacttcctccagatcaggagtgacatcagagag
ggcaggttgaagtgtcctctgagtgcagctgtagtactggcctcctatgctgtgcagtct
gagctaggtgactactccccagaccttctccctggttacctgtccaagagccacttcctc
ccagagcaggatgatgacttcctgtctagagtagaggctctgtacccagggcacaggggg
ctgaagcagagtgaggcagagctgtgttttctcaacacagcaagaactctggagatgtat
ggagtggagctacacactgccatggactccgacagttcccccctattggtgggattggcc
tcagggggcgtggctatcttctgtaacatgatttgctccagtttcttcccctgggtgaac
atcatcaagatatccttcaagaggaaacgcttccttatgcagctcagacgcaaacatggg
gagacgcaggactgtgtagtgagcctggtcctgccatgccccagggcctgtaagaacctg
tggaggtcatgtgtggaccatcactgcttcttctacaccaacctggcaacccgtagccca
caccacaccaacctggcaacccagatacacaacaagctgctcccacaacactgggccttg
ggcagcactaaaacagacagtggtccagtgtgtaagaaagtgatgggtgggatggagtgg
aacccagctctgaggggatccacctcgtcagaacacctggagaccaagagcctaccgtcc
cgatcccctccgctcacacccaactggcggagtcctcgtgtacgtcatggcgcccgtaaa
ccccgcccctcctcagtggagctgaacaatgacctgcgagatgtgtcggagggggaggat
gtcttttacacctacagggtctccctcagcagcagcaggggcagccaggagggcacgcct
acacacagtgtttctggcactcacagccaaggaggtggatggtcgcaggttgatgacatc
agcacaggagaggaagacattaaggccacctctcactaccgggacaagcgtgctcttggt
gatggcgacctgctattggtgcgtctcgctcctgatgacgatggaaagtttggtttcaat
gtcaaaggtggcgtggaccagaagatgtccctggccatatcccaggtcaaccctgactcc
cctgcggggcgggttgagccaaggttgttggaaggtgaccaggtcgtgctgatcaacggt
cgcgacatctctgaacacacgcatgaccaggtggtcatgtttataagagccagcagagag
tcccactccagagaactggctctgcttatacgacgcaaaggtccagggcgtgtggccccc
ctgctgcagtttccctctgccctgtctctgactggccaatcacacggtgatccactgctt
ctgcctggccaatcagaacaaggccagacacttgaagagtccatgaaacaactggagagg
ggaatccagacaggcactctcaccttccacttcgagaacctgtacatgaggaagcctggc
ctgtcggtagcctgcgctcgtctccctgagaacacagacaagaacagatacaaggacgtg
ctgccctatgacatctccagagtggtacttcaggaccaagaggactacatcaatgcaagc
cacatcacggtgatgcccccagggtctggtgtgtgtctgcgctacattgcagctcaagga
ccgctgcctcagacctgcactcacttctggcagagtgtgtgggagcaacacacacacacc
atcatcatgctcaccacactcaccgagagaggacggactaagtgccaccagtactggcca
caccctcctgaagtgagggattatgggtacctgagggtcagctgccactctgaggaatgc
aacctggcctacgtcacacgccaattcaccctcacacacacacagctgagagaggagcgt
tcggtgacccacctgcagtatgtagcatggccagatcatggtgtacctgacgacccctca
gacttcctgctgtttatcacctctgttagagagaggaggacaggagacacaccacttatg
gtgcactgcagcgcagggattgggcgtacaggtgttctcattaccatggagacggcgttg
tcgctgttggagagcggtcgacctgtggtccctctggacatcatcaggacgctccgagac
cagagggccatgatgatccagaccacgaaaaggtcaaagggccaggagctgtttgaccag
atcaggtatcatctggacctggtggaggctgactactttggactgcagttcatggaccca
gaacaagtctcacactggctggatgtgtccaagccaataaagaaacagatcagagatggt
cctccatacagactgtttttcagggtgaagttctactcctcagagcccaataacctacat
gaggagttcaccaggtacctgtttgtgctgcagcttcgacaagacattctgtccggcaag
ttgaagtgtccatatgatgtctcagtagacctgggggcctactgcttacagagtgaactg
ggggactgtgaccctctagagcattctcctgagctggtgtcagagtttcgcttcacaccc
aaacagagtgagaccatggaggcagacatctttaacaagtgggtggacctaaggggtacg
gatccatcccaggcagagaccagcttcctcaacaagtgtaaatggctggagctgtacgga
gtggacatgcactttgtcaagggaagggacggagcagagtacgctctgggtctgactccc
actggcatcctggtgtttgagggctccaccaagataggcctcttcttctggcccaagatc
acccgcctggatttcaaaaaaagtcgactcaccctagtggtgacggaggacgatgatcag
gggcgggagcaggagcacacctttgtgttccagttggacagttcgaagacgtgtaaacac
ttgtggaaatgtgctgtggagagccacgccttcttccggctgcgccagcccacagctggg
aaggcctccagcagtgacttcacacgccttggatcacgtttcaggttcagtggaaagact
gagtaccaggcgacccacggagggaggctgaggagggccagtacgtttgagaggcgaccc
agcaagagatacccctctcgcactcactctttgggtggcaaggccctctctccagccaaa
ccaccacatatcagcgcccacaccagccccgaacctagtctacacccatctttttctcca
tctatctctgttcagtaccagcgtaacatccctatagcccatgagccttggcacccagcc
ctcacaccccccatctacctacaacactcaggacacacatccccgcacagtttccctcgg
cgtggtcctgtcctgggaggggagcagcagttcagtgttgaggagaacgagacgccgtac
tctggaagcatacaccatcgccaccgcagacacacacactacgacagccaggagacttac
tgtcacacacacaagaacaaacacagagcccctccctgtcctgtagatgagttggaggtc
tgtctgctcaaccccctggagacagacagcaacacctctccctggccttcactacatgtc
aacatggacaacaaggcagaggagaagcagttgtctgagaagtctctccagccctcctct
ccctgcagccctccagaccatctaaagtgtaacatctacaaagctcagatggaggctgtc
tatagagatgctccgctgacgcctagagggaagacctgtagtctggagatcaacgacagg
tatcagagctcctgtcaggactctcgagactctgccacttccagtctgaccacagagaaa
acctccctccgccccgaccacaactcaaccacagacagacacgccaagtctaaccctaac
accaaccgcaggaaaagactggtcaggcagttcagctttaaccatgaggacgaggataat
ctcccagaggcacttgcagcgatctcttcccggagcactgggaagtgtggatctaacaac
tcactggacaaccagacacaaccctccatataccctcaggaaacaaacacacagatggac
atgccgatactggagctgaggagtccatgccgtgagcgttctcactctccccacctctcc
ccttccttctaccacacctccatccctcccctggtaccctgccttgcctctcacaccaac
agcgaggaggagatgaggttgggcagagagaagattctcagggctctcctgatgacggag
ctctga
DBGET
integrated database retrieval system
