Oncorhynchus tshawytscha (Chinook salmon): 112236461
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Entry
112236461 CDS
T05605
Symbol
lars2
Name
(RefSeq) probable leucine--tRNA ligase, mitochondrial
KO
K01869
leucyl-tRNA synthetase [EC:
6.1.1.4
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
112236461 (lars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
otw01007
]
112236461 (lars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
otw03016
]
112236461 (lars2)
03029 Mitochondrial biogenesis [BR:
otw03029
]
112236461 (lars2)
Enzymes [BR:
otw01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.4 leucine---tRNA ligase
112236461 (lars2)
Amino acid related enzymes [BR:
otw01007
]
Aminoacyl-tRNA synthetase
Class I (U)
112236461 (lars2)
Transfer RNA biogenesis [BR:
otw03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
112236461 (lars2)
Prokaryotic type
112236461 (lars2)
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
112236461 (lars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
tRNA-synt_1g
Anticodon_1
tRNA-synt_1_2
tRNA-synt_1e
tRNA-synt_1f
Motif
Other DBs
NCBI-GeneID:
112236461
NCBI-ProteinID:
XP_042160756
LinkDB
All DBs
Position
LG23:18032118..18088478
Genome browser
AA seq
914 aa
AA seq
DB search
MQMAAYRVSLCLCGSGLFRLGLGRPRSRADGAPLPRLLSPCPRHGARTLFSETGVWDRNY
KADTRRRVEQWWHPRIMEQWRRDTLEESSHRKKFYVLSMFPYPSGRLHMGHVRVYTISDT
IGHFQRMRGHQVLNPMGWDAFGLPAENAAIERGLDPEEWTKSNIQSMREQLDSLGLCFNW
DKEVTTCLPDYYRWTQWLFVKLFKAGLAYQKEAVVNWDPVDQTVLADEQVDDKGRSWRSG
ALVEQKLLRQWFIKTTNYAKPLLDALAELPEWYGVKAMQANWIGDCTGCYFDFHLKVNGE
ETGETLAGYTSSPEAVFGAAYLSIVPSHRLLHGTSPVRSALERVLQTGRDCLTEVTAHNL
FTGQELPLVISSKQEFEGHLDTVIGIPDSRVEDASVARALGLSWSPVLKSQEDGGHTLIN
SAEFTGLSREVAFDSITQKAREREVGGHLTSTKLRDWLISRQRYWGTPIPMVHCGFCGPV
AVPEEQLPVTLPKLPSPTGKGASPLEHADDWISCTCPRCKGPARRETDTMDTFVDSSWYY
FRYTDPHNQDRPFERSLADHWLPVDVYIGGKEHAVMHLYYARFLSHFCRDQGLVGHREPF
KKLLVQGLIKGQTFRAADSGQYLKRDHIDFTGEEPVQVGSKAGLQVTWEKMSKSKHNGLD
PQEVVQQYGIDTVRLYILYAAPPEQDILWDVKTDALPGVLRWQSRLWGLVTKLRRARQDG
DVPNPSLLKRKEQADARKIWENKNFAVEQVTGHFTEDFLLNAAIARLMGLTNTLSNVSSR
VLQHSVEFEEALATLCVMTAPMAPHLASELWAGLSQVRNPLSPLLSRGGDVLQQPWPTPD
PLYLETPDTLELVVRVNNKVCGTVLVPRQVAQDTEQVRALVLGSELGQRLLGDRTIKKAI
LSPRTALINFLIEE
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgcagatggcagcgtacagagtgtctctctgcctttgtggcagtggcctgttcaggttg
ggtttggggcgacccaggtccagggctgatggtgcccccctgccccgcctcctctccccc
tgccccagacacggggctcggaccctgttcagtgagacaggtgtctgggacaggaactat
aaagcggacaccagacgcagggtggagcagtggtggcacccccgtatcatggagcagtgg
cggagggatacgctggaggagagttcccataggaagaagttttatgtcctgtctatgttc
ccgtacccctccggccgtctccacatgggccatgtacgggtctacacaatcagtgacacc
atcggacacttccagaggatgaggggccaccaggtgctaaacccaatgggctgggatgct
tttggactcccagcagagaacgctgccatcgagagaggccttgacccggaggaatggact
aagagtaatatccagtccatgcgggagcagctcgacagcctagggctctgctttaattgg
gacaaggaggtgaccacctgcctaccagactactacaggtggacccagtggctgtttgtc
aagctcttcaaggcaggacttgcctatcagaaagaggcggtggtgaactgggaccctgtg
gaccagacggtgttggctgatgagcaggtggatgacaaagggcgctcctggaggtctgga
gctctggtggagcagaaattactcaggcagtggttcattaagaccaccaactacgccaag
cccctcctggacgccctggcggagctgccagagtggtacggggtcaaggccatgcaggcc
aactggattggagactgcaccggctgctacttcgactttcacctcaaggtgaatggggag
gagacaggggagactctagcaggctacacctccagcccagaggcagtgtttggggctgcc
tacctgtccattgtcccctcccacagactgctgcatggtaccagcccagtccgctcagcc
ctggagagagtcctgcagacaggcagagactgcctgacagaggtcaccgcccacaaccta
tttaccggtcaggaacttcccctggtgatctccagcaagcaggagtttgaaggtcatcta
gacactgtcatcggtatccctgacagccgtgtggaggatgcttctgtggccagggctctg
ggtctgagctggagcccagtcctgaagagccaggaggatggaggacacacactgatcaac
tctgctgagttcacaggcctcagcagggaggtcgcttttgactccatcacccagaaggcc
agagagagagaagtgggcggccacctgaccagcaccaagctcagggattggctgatttcc
cggcagcggtactggggcacgcccatccccatggtgcattgtgggttttgtggtcctgtg
gcagtccctgaggagcaacttccagtcaccctccccaaactaccgtcccccacggggaag
ggggcatccccactggagcacgctgatgactggatcagctgtacctgtcccaggtgtaaa
gggccggccagaagggagaccgacaccatggacacgtttgtggactcatcctggtactat
ttcagatacactgacccccacaaccaagacaggccttttgagcgctccctggcagaccac
tggcttccagtggacgtgtacattggggggaaggagcatgctgttatgcacctgtactat
gcacgtttcctcagtcacttctgtagggatcagggcctagttggacacagggagcctttc
aagaagctgctggtgcagggcctcatcaagggccagacatttagagctgcagacagcgga
cagtacctgaagagagaccatatcgacttcacaggtgaggagccggtgcaggtgggaagt
aaggccgggctgcaggtgacgtgggagaagatgtccaagtcgaaacacaacggcctggac
cctcaggaggtggtgcagcagtatggcatcgacactgtccgtctttacatcctctacgct
gctccccctgaacaggacatcctctgggatgtcaagacggatgctctgcccggggtactg
cgatggcagtctcgtctgtggggtctggtgaccaagctgaggagggctcggcaggatggg
gacgtccccaacccctcgttgctgaagaggaaggagcaggcagacgccaggaaaatctgg
gagaacaagaactttgccgtggaacaggtcacaggtcacttcacagaagacttcctcctg
aatgcagccatcgctcgactcatgggactcaccaacacactctctaacgtgtcatctcgt
gtgctgcagcacagtgtggagtttgaggaggctctcgccacgctgtgtgtgatgaccgct
cccatggctccacacctagcctctgaactctgggcagggctgagccaggtgaggaacccc
ctgagccctctcctctcccgcggaggagacgtgctgcagcagccgtggcccaccccagac
cctctgtacctggagacccctgataccctggagctggttgtacgggtcaacaacaaggtt
tgtgggacggtgttggtgcctcgacaggtggcccaggatacagagcaggtacgggcgctg
gttctggggagcgagctgggacagcgtctcctaggagaccggaccatcaagaaggccatt
ctgtcccctaggaccgcccttatcaacttcctcatagaggagtga
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