Oncorhynchus tshawytscha (Chinook salmon): 112236462
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Entry
112236462 CDS
T05605
Symbol
limd1a
Name
(RefSeq) LIM domain-containing protein 1
KO
K16682
LIM domain-containing protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112236462 (limd1a)
03036 Chromosome and associated proteins [BR:
otw03036
]
112236462 (limd1a)
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
112236462 (limd1a)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
112236462 (limd1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
112236462
NCBI-ProteinID:
XP_024260822
LinkDB
All DBs
Position
LG23:18113842..18130699
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AA seq
192 aa
AA seq
DB search
SVPGYLYHDVCFTCSACSRRLRGKAFYYVGGKVFCEEDFLYSGFQQSADKCNACGHLIMD
MILQALGKSYHPGCFRCVICNDSLDGVPFTVDTENKIYCVKDYHRVLAPKCAACNQPILP
SKGSDETIRVVSMDKDYHVECYHCEDCQMELNDEEGHRCYPLDGHLLCHACHLKHIEPGC
ASPTAASYQHQF
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
agtgtgccaggctacctctatcatgatgtctgcttcacctgcagcgcttgcagcagaagg
ctacgggggaaagcattttactacgtcggtgggaaggtgttctgtgaagaggactttctg
tattctggattccagcagtctgcagacaagtgtaacgcatgcggacatctgatcatggat
atgatcctgcaggcccttgggaagtcctaccaccctggctgtttccgttgtgtcatctgt
aacgacagtctggacggagtgcccttcactgtggacacagagaacaagatttactgtgtc
aaagactaccacagggtcttggcccccaaatgtgcagcatgtaaccagcccattctgcct
tcaaagggctctgatgaaaccatccgagtggtatccatggataaagactaccacgtggag
tgctatcactgtgaagactgtcagatggagctgaacgacgaggaggggcaccgctgctac
ccgctggacggccacctcctctgccacgcctgccacctgaagcacatcgagccgggctgc
gcctcacccaccgctgcctcctaccagcaccagttctag
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