Oncorhynchus tshawytscha (Chinook salmon): 112236511
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Entry
112236511 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: epithelial splicing regulatory protein 2
KO
K14947
epithelial splicing regulatory protein 1/2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112236511
Spliceosome [BR:
otw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
112236511
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_1
Motif
Other DBs
NCBI-GeneID:
112236511
NCBI-ProteinID:
XP_042186987
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Position
LG12:73689923..73720518
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AA seq
742 aa
AA seq
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MASHSDTLVVFFGATAGANGGKLGSDEREIILLVWQIVDLHEKKVGKLQRRLVKPDSLEL
TDQSKEETGLSVEELYKAEPLDKVLQQFQQSVSAELKALGRSSYTLCVDGPLIIRQALHP
EASKKNLVLPECFYSFVDVRKEFHKCCPNAGQVQDLTLHSMLEYVCIPELPLSEQVMGLK
EVRCMVQLSLHILAEPYNHKFSCFEAVKYKLESGACSKTEPVDSETVIRARGLPWQSSDQ
DISRFFKGLNIAKGGVALCLNSQGRRNGEALVRFINQEHRDLALERHKHHMGSRYIEVYK
ATGEEFLKIAGGTSNEVAQFLSKENQVIIRMRGLPFTASPQDVLTFLGADSPVTDASDGL
LFVKYPDGRPTGDAFVLFSCEEYALNALKKHKQILGKRYIELFRSTAAEAQQVLNRYMST
PLISTLPSSSMVPMPVLATPPYLATGSTRDCVRLRGLPYTAAIEDILEFMGEHTIDIKPH
GVHMVLNQQGRPSGDAFIQMRSADRAFMVAQKCHKKMMKDRYVEVFQCSTEEMSFVLMGG
TLNRSGLSPPPCKLPCLAPPAYAAFPSPAMLSEAALYQPPLLATPRTPQPPHSPHPTLAY
YPHSTTLHLYMNMNMNYTAYYPSPPVSPSTMSYFASPPGSVALAAQQPHAQGHVASPMMP
QHGALVRMQGLPYNAGVKDILSFFQGYQLQPDAVLLLYNFSGQRSGEALITFPSEESARR
AVAERANHPLSGLPVRLLVCCD
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgcacagtgatactctggtggtgttctttggggcaacagctggtgcaaatggg
ggtaaactgggttcggatgagagggaaataattctcttggtgtggcaaattgtggatcta
catgagaaaaaggttgggaaacttcagagacgtcttgtgaagcccgactctttggagttg
acagaccagagtaaagaggagactgggctgtctgtggaggaactctacaaggctgaacct
ctggacaaagttctgcaacagttccagcagtccgtctcagcggagttgaaggctctgggc
agaagctcctacacactgtgtgtcgacgggcccctcatcatacgacaggcccttcaccct
gaggcctccaagaagaacctggtcctgccggagtgtttctactcctttgtggatgtgagg
aaagagtttcacaaatgttgtcccaatgctggacaggtccaggacctaacactgcactct
atgctagaatatgtgtgcatcccagaacttcccctgtcagagcaggtgatggggctgaag
gaggtgaggtgtatggtccagctctccctgcacatcctggctgagccatacaaccacaaa
ttctcatgctttgaagctgtgaagtacaagcttgaatcgggagcatgcagtaagactgag
ccagtggacagtgagacagtgatcagagccagggggttgccatggcaatcctctgaccag
gacatctcccgcttcttcaagggcctcaacatcgccaagggtggtgtggccctctgtctg
aactcccagggcaggaggaatggtgaagccctggttcggttcatcaaccaggagcacaga
gacctggccctggagagacacaaacaccacatgggcagcagatacattgaggtatacaaa
gccacaggagaggaattcctcaagattgctggaggcacatccaacgaggtggcccagttc
ctgtccaaggagaaccaggtgatcatcaggatgaggggtcttcccttcaccgcctctccc
caggacgtgttgaccttcctgggggctgacagccccgtgacggacgccagcgacggccta
ctcttcgtaaagtaccctgacgggcggcccacaggcgacgccttcgtcctgttctcctgt
gaagagtacgctctgaacgccctgaagaaacacaagcagatcctgggcaagagatacatt
gagctgttcagaagcactgcagcagaggcccaacaggtcctgaaccgttacatgtccaca
cctctgatctccacgctgccctcctcttccatggtccctatgccggtcttggccacgccc
ccttacctggcgactggcagcacgcgggactgtgtccgtttgcgaggtctaccctacacc
gctgctatagaggatatactggagttcatgggagaacacactattgatattaaaccacat
ggagttcatatggtgctcaaccaacagggtcgtccctcaggtgacgccttcattcagatg
aggtcagctgacagggcgttcatggtggcccagaagtgccacaagaagatgatgaaggac
cgctatgtggaggtgttccagtgttctactgaggagatgagcttcgtcctgatgggagga
acactgaaccgcagcggcctgtcccctccaccctgcaaactaccctgtctggctcctccg
gcctatgctgcgttcccttctcctgccatgctctctgaggctgctctgtaccagcccccc
ctactggccacccccagaacaccccagcccccacacagcccccaccccaccctggcctac
tacccccacagcaccaccctgcacctctacatgaacatgaacatgaactacactgcgtac
taccccagccccccagtctctccctccacgatgagctactttgcgtctcctccagggtca
gtagcgttagcggcccagcagccccatgcccaaggccacgttgcctctcccatgatgccc
cagcacggcgctctagttaggatgcagggtctgccctacaacgccggggtcaaagacatc
ctcagcttcttccagggataccagctccagccggacgccgtcctcctgttgtacaacttc
agtggccagcgtagcggcgaggccctgatcaccttccccagcgaggagtcagccaggcgg
gccgtggccgagcgcgccaaccaccccctgtctggtctccccgtccgtctgctggtgtgc
tgcgactga
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