Oncorhynchus tshawytscha (Chinook salmon): 112236517
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Entry
112236517 CDS
T05605
Symbol
mkks
Name
(RefSeq) LOW QUALITY PROTEIN: McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin
KO
K09492
McKusick-Kaufman syndrome protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
otw03110
]
112236517 (mkks)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
otw03037
]
112236517 (mkks)
Chaperones and folding catalysts [BR:
otw03110
]
Heat shock proteins
HSP60 / Chaperonin
112236517 (mkks)
Cilium and associated proteins [BR:
otw03037
]
Primary cilia and associated proteins
BBS-CCT complex
112236517 (mkks)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Chlam_vir
Motif
Other DBs
NCBI-GeneID:
112236517
NCBI-ProteinID:
XP_042161613
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Position
LG24:31389060..31398099
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AA seq
736 aa
AA seq
DB search
MSRVTKKASSVCTDSPLSMSEVCQKMTLMRQILTSCFGPNGRLKQVHNNVGGHVLTTSTS
TSLLQAVSSSEPLLKLITASILNHLSRFSDCGLYTGILCFSLIDHVQKSGLRPSVAIKIN
KQLLEVCTSFLNQEDCGCKVNVDFNSCQSLVTLARSVISSKPACVLTEGEQQHISTLAVH
AFLLTVPCGDTPGSPDRVRLGKTVTVSIEGQFVLDSAVFPGLLVNVPDMQLHPTDSERTR
RGPGPFRLALFTVSLSGDLSEFGEGSLEVHSGAPDPEDLILDELLKLGEQAVTDQVEVFM
CQRVIHPVLQHYLRRHGVLVVERLGIALIEPIVQMTGAQAVALYQTPIPPEAYGQVKGCC
VRTVGSREMLHLLPPREPAPAVCTMVLCHRNDTMLNELKAVCQRAEHVLRLTLRDPVALL
GGGCTETHMAAYISNKGTTEAAKAALSLGVSQSQYLLGLNGFCSSLEAVALALVHDGETG
LVDLSYAHHWSVPQGEAIHSGTVPQGEAIHSGTVPQGEAIHSGTVPQGEVVHSGTVLQGE
AIHSGTVLQGEAIHSGTVLQGEAIHSGTVAQGEAIHSGTVAQGEAIHSGTAQGEAIHSGT
VAQGEAIHSGTVAQGEAIHSGTVPQGEAIHSGTVAQGEAIHSGTVPQGEAVQRGDGDEVP
ATCGCGLVERSARPGLEWTPLNTRYPSRSAPLVVGKDTPPQLRVLDSFTAKLNALQVAVE
MANLVLDIRYVIQDVN
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgagttaccaagaaagcgtcatctgtctgtacagacagcccactgagcatgagt
gaagtctgtcagaagatgacactgatgaggcagatcctcacctcttgtttcggacccaat
ggtagactgaagcaagtccataacaacgttggtggacacgtcctgaccacctccacctct
acatccctacttcaagctgtttcctcatcggagccgttactcaaacttataactgcctcc
atcttaaaccacctgtctcggttcagtgactgtggtctgtacactggcatcctctgtttt
tccctcattgaccatgttcagaagtcaggcttgagaccaagtgttgcgatcaaaatcaac
aaacaactattggaggtttgcaccagtttcctcaaccaggaggactgtggctgtaaagtg
aatgttgatttcaacagctgccagagcttggtgacactagccaggagtgtcatctctagc
aaacctgcctgtgtgttgactgagggtgaacaacagcatatcagcacgttggctgtccat
gcctttctactgactgtcccctgtggtgacaccccgggctccccagacagagtccgtctt
ggtaagactgtgactgtctccatcgagggacagtttgtgctagattctgcagtgtttcca
ggtctgctggtgaatgtcccagacatgcagcttcaccccacagactctgagagaaccaga
cgggggcccggtcccttccgactagccctgttcacggtgtctctctcaggggatctatct
gagttcggagaggggtccctggaggtgcacagtggagcccctgacccagaagacctcatc
ctggatgagttactgaagctgggagagcaggcagttacagaccaggtggaggtgtttatg
tgtcagagagtaatacaccctgtactgcagcattacctgcggagacacggggtcttggtc
gtagagagactcggcattgcactcatcgagcccattgttcaaatgacaggtgctcaagca
gtggcgttgtaccagacccctatccctcctgaggcctatggccaggtgaaaggctgctgt
gtcaggaccgttggatccagagagatgctgcatctccttccacctcgggaaccagcacca
gctgtctgcaccatggtcctctgccacaggaacgacaccatgctcaacgaactgaaggct
gtgtgtcagagggcagagcatgtgttgaggctgaccctgagagacccagtagctctgctg
ggaggaggatgcactgagacacacatggcagcctacatcagtaacaagggcactactgaa
gcagcgaaggcagcgttatccctgggagtctcccagtctcagtacctactgggactgaac
gggttctgctcctccctggaggctgtagccttggccctggtgcacgatggagaaaccggc
ctcgtagacctcagctacgcccaccactggtctgtgccccagggagaggctattcattcg
ggtactgtgccccagggagaggctattcattcgggtactgtgccccagggagaggctatt
cattcaggtactgtgccccagggagaggttgttcattcgggtactgtgctccagggagag
gctattcattcaggtactgtgctccagggagaggctattcattcgggtactgtgctccag
ggagaggctattcattcgggtactgtggcccagggagaggctattcattcgggtactgtg
gcccagggagaggctattcattcgggtactgcccagggagaggctattcattcgggtact
gtggcccagggagaggctattcattcgggtactgtggcccagggagaggctattcattcg
ggtactgtgccccagggagaggctattcattcgggtactgtggcccagggagaggctatt
cattcgggtactgtgccccagggagaggcagtccagcggggtgatggagatgaggttcca
gccacctgtggctgtggcctggtggagaggagcgcccggcctgggctggagtggaccccc
ctcaacaccaggtacccttcacgttctgcccccctggttgtgggtaaggacactccccct
cagctcagggtgctggactccttcacagccaaactcaatgctctgcaggttgccgtggaa
atggctaatctggtactggacattagatacgtcatccaagatgtcaactga
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