Oncorhynchus tshawytscha (Chinook salmon): 112236547
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Entry
112236547 CDS
T05605
Symbol
si:dkey-3h3.3
Name
(RefSeq) E3 ubiquitin-protein ligase DTX3L isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
112236547 (si:dkey-3h3.3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112236547 (si:dkey-3h3.3)
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112236547 (si:dkey-3h3.3)
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112236547 (si:dkey-3h3.3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-RING_5
KH_DTX3L
zf-RING_10
zf-RING_11
DUF1272
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
112236547
NCBI-ProteinID:
XP_024260907
UniProt:
A0A8C8F5E2
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All DBs
Position
LG12:complement(4202088..4208246)
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AA seq
429 aa
AA seq
DB search
MANASLKEVFSDVILTVDPNTFKEPNQVKYLLTGCGNRVTGTLHYEVRGSFDEIEDLFVK
MSSLDRYAAPNLRDSPLRHLQRPRSPSPVKPVAIVGAVWDFIQQRCSKELKRIQGEDVLI
HKPRDKMEVTFQSHRKDSVRVHFARERFVTFYQRLATDLKVQTYSLDPQYYKSLQRQFPE
LLIEGGPSKDNITVTGRYMHIVMLEDFLRHGSSSPVTSQRPLTPQRVSPRASGTTRNKQS
DDEEEESCPICLDTIKEDRKKTLACKHSFCRCCLEVAFKTKPVCPTCGAVYGELKGTQPK
GGTMAVTQERSSLSGYDKYGTIVIQYHIPSGIQKEEHPNPGQTYRGASRTAYLPDSSEGR
NVLALLKRAFDQRLTFTIGRSSTTGMENMVTWNDIHHKTSRSGGTSCYGYPDPDYLRRLQ
DELKVKGIY
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatgcgtcattgaaagaggtattttcagacgtcattctcactgtagatccgaac
actttcaaagagcccaaccaggtgaagtaccttctcactggatgtggtaaccgcgttaca
ggaaccttgcattacgaagtgcgaggatcatttgatgaaatagaggacctgtttgtgaag
atgtcaagtctagacagatatgccgcccccaatctcagagacagtcctcttcgtcaccta
cagcgtcctcggtcacctagtccagtgaaaccagtggcgatagttggagccgtttgggat
ttcatccaacagagatgctcaaaggagttgaagagaatccaaggggaagatgtcttaatt
cataaacctcgtgacaaaatggaggtgacctttcaaagccacagaaaagactcggttcgg
gttcatttcgccagagagcgctttgtcacgttctatcagagactcgctacagatctgaaa
gtgcagacttacagtttggatccacaatactacaaaagcttgcagagacagtttccagaa
cttttgattgaaggaggccccagtaaagacaatattacagtgacagggcgctacatgcac
attgtgatgttggaggattttctacggcacggttccagttcccctgtgacatcacaacga
cccctgacaccccagagagttagcccccgagcctctggtactacacgcaacaagcaatcg
gacgacgaagaagaagagtcatgtccgatttgtctggacaccattaaagaggacagaaag
aagacgttggcatgtaaacactcgttctgtagatgctgtctggaggtggcgttcaagacc
aaaccggtctgtccaacctgtggggcagtctatggggaactgaaggggacgcagccaaag
ggcgggactatggctgttactcaggaaagatcttctttgtctggatatgataagtatgga
acaatcgtgattcagtaccacattccaagtggaatacagaaggaggagcatcccaaccca
ggtcagacttaccggggtgcatcacgtacagcgtatctcccagattcctcagagggcagg
aatgttctggctctcctgaagagggccttcgaccagcgactcacgttcactattggccga
tcttccaccacaggcatggaaaacatggtcacgtggaacgacatccaccataaaacctcc
aggagcggaggcaccagttgctatggataccctgaccccgactacctgagacgtctacag
gatgaactgaaggtcaaaggaatctattga
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