Oncorhynchus tshawytscha (Chinook salmon): 112236611
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Entry
112236611 CDS
T05605
Name
(RefSeq) rho GTPase-activating protein 42-like isoform X1
KO
K20651
Rho GTPase-activating protein 42
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112236611
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
112236611
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
RhoGAP
SH3_9
PH
SH3_1
TAtT
SH3_2
IMD
Motif
Other DBs
NCBI-GeneID:
112236611
NCBI-ProteinID:
XP_042152471
LinkDB
All DBs
Position
LG13:92658038..92860752
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AA seq
990 aa
AA seq
DB search
MGLPTLEFSDSFLDSPDFRERLKYHEIELDRTNKFIKELIKDGNMLITALKNLSTAVQKF
SQSLQEFQFECIGDAETDDEVNIAQSFKEFSQLLNTVEEERRRLIQNADDVLIAPLEKFR
KEQIGAAKEGKKKFDKETEKYYTVLEKHLALSSRKKEPFLQEADTQIDKERQVFYDASLE
YVFKIQEVQEKKKFEFVEPLLAFLQGLFTFYHEGYELAHEFEPYKQQLQFNLQNTRNNFV
STKQEVEKLMKRIRSADQDYKPPGQWTMEGFLYVQEKRPLGCTWTRHYCTYEKSSKAFTM
TTFETKSAGKQNGLVVSPSEMFKLKSCIRRKTDSIDKRFCFDIEVVERTDICQGTLFRPL
QLKFCKVRHGIVTLQALSESNRRLWLEAMDGKEPIYNLPAILSKKEETYLNEAGFNFVRK
CIDLVEVRGINTLGLYRIGGVNSKVQKLMTTVFATKAPVDMNLDPDTWDNKTITSGLKNY
LRCLSEPLLTFKLHKDFIMAVKCEDQNYRVRAVHALVHKLPERNKEMMELLIKHLVTVST
HSQFNLMTVSNLGVIFGPTLMRSQEETVAAMMNIKFQNIVVEILIENFDKIFHQPPDPNV
PLPQPQSRPSSRRSRAICLSTGPRKPRSIYTPTLCLADADSPCTGDTFSSSPGSTPLGSM
ESLSSHSSEQNSSSKTTGTSSHHQPKDKASHPPGLWLGMGQGTSQWLGMGQGTGLKQGMS
QGTSLGQEMGQGTSMGQEMGQGPTLGLRCSPSQLSSNGPGKGSVPSCLSSPESSSREDVE
TGRTDGESEGDALSLSSTSTTATPRGSIGPKKAPHSQTDLRPVPVTQLTQLNRSAAPSLR
SLYISEGRRSLAGSVQSLSAVTLDQKDQQKDRKESVESTDPPDRPPKLVTRRRLDRPDKM
ESSSNGYQRPGSVVAARAMLFENCPSAAQTTPVGRDAKAMYSCEAEHSHELSFPQGALFS
NVYPSIEPGWIQATFQGKTGLIPENYVVYL
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgggactcccaactctggagtttagcgattcttttctggatagccctgatttcagagaa
cggctaaaatatcatgaaatagagttggaccgaacaaacaaattcatcaaagaactgatc
aaagacgggaatatgttgataacggcgctaaagaatctgtctactgctgtccagaagttc
tctcagtccctccaggagttccagtttgagtgtataggagacgcagagacggacgatgag
gtcaatatcgcccagtcgttcaaggagttctcccagctactgaacacagtggaagaggag
aggagacgcttgatccagaatgcagatgatgtgctaattgcacctttagagaagttcagg
aaggaacagattggagctgcgaaggaagggaagaagaagtttgacaaggagacagagaaa
tactacaccgttctagagaagcatctggccttgtcctccaggaagaaagagccgttctta
caagaggctgacacacagattgacaaggagagacaggtgttctatgatgcttccctggag
tatgtcttcaagattcaggaggtccaagagaagaagaagtttgagtttgtggaaccgctg
ctggccttcctgcagggtctgttcacgttctaccacgaaggatatgagctcgctcacgag
tttgagccttacaaacaacagctccagttcaacctgcagaacacgaggaacaactttgtg
agtacgaagcaggaggtagagaaactgatgaagagaatcagatcagctgatcaggactac
aaacctccagggcagtggaccatggaagggttcctctacgtccaggagaaacggccgctg
ggatgcacgtggacgcgacactactgtacgtatgagaagagcagcaaagccttcaccatg
accacctttgaaaccaaatcagctggcaaacagaatggtctggtggtgagtccatctgag
atgttcaagctgaagtcctgtatccgaaggaagactgactccatcgacaagcgtttctgc
ttcgacatcgaagtggtggagagaactgacatctgtcaaggaactcttttccgacctctt
cagttaaagttctgtaaagtccggcatggcatcgtgactctccaggctctgtctgagtcc
aacagaaggctgtggctggaggctatggatggcaaggagccgatttacaatcttccagcc
attctgagcaagaaagaagagacgtacctaaacgaggcagggtttaattttgtgaggaaa
tgtattgacttggtggaggtacgagggatcaacacgttgggcctctacagaataggaggg
gtcaactctaaggtccagaagttgatgaccactgtgtttgcaaccaaggctccagttgat
atgaacctggacccagacacctgggacaacaagaccatcaccagcggcctgaagaattac
ctcaggtgtctctctgagcctctgctgacctttaagctccacaaagacttcatcatggcc
gtcaagtgtgaagaccagaactacagggttagggccgtccatgccttggtccacaagctg
cctgaaaggaacaaggagatgatggagctactgatcaaacacctcgtcacagtgtccacc
cacagccagttcaacctgatgacggtgtccaacctgggcgtgatcttcgggcccacgttg
atgaggtcacaggaggagacggtggccgccatgatgaacattaaattccagaacatcgtg
gtggagattctcatcgagaactttgacaagatcttccaccagcctccagaccccaacgta
cctctgccccagccccaatcccgaccaagctcacgcaggagcagggccatctgcctgtcc
acaggccctaggaagcctcgcagcatctacaccccaacactgtgccttgcagacgctgac
agtccttgtacaggtgacacgttcagcagcagtccaggcagcacccccttgggaagcatg
gagtccctgtcctcccactcctctgagcagaacagctcctccaagaccactggcacttcc
tcccaccaccagcccaaagacaaggcttcccatccccctggcctgtggctggggatgggg
caggggacgagccagtggctggggatgggccagggtaccggcctgaagcaggggatgagt
caggggaccagcctggggcaggagatgggtcaggggaccagtatggggcaggagatgggt
cagggcccaaccctgggtctccgttgctccccctcacagctctcttccaacgggccaggg
aagggaagcgtcccatcctgcctcagcagcccagagtctagctccagggaagacgtggag
acagggaggacagacggggagtcggagggagatgctctgagtctgtcctcaaccagcacc
acagctacacccagggggtccatcggcccgaagaaagccccccactcccagacggatctc
cggccggtgcccgtgacccaactgacccagctgaaccgctcagccgctccctctctgagg
tcactgtatatatctgaaggccgtaggagtctggcaggttcagtccagagtctgtctgcc
gtgacgctggaccagaaagaccaacagaaggatcggaaggagagtgtagagtctacagac
cccccagaccgccctcctaaactagtcacccgtcggagattggacagaccggacaagatg
gagtcctccagcaacggataccagagaccaggatcagtggttgctgcaagagccatgctg
ttcgaaaactgcccttcagcggctcagaccacacctgttggaagagacgccaaggccatg
tactcctgtgaggcagaacacagccatgagctcagcttcccacagggggctctcttctca
aacgtgtatccatctattgaacctggctggatccaagcaacgttccagggaaagactggc
ctgatccctgagaactatgtggtttatctctaa
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