Oncorhynchus tshawytscha (Chinook salmon): 112236647
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Entry
112236647 CDS
T05605
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112236647
Membrane trafficking [BR:
otw04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
112236647
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
Ig_2
LRR_6
LRRNT
LRR_9
C2-set_2
V-set
Motif
Other DBs
NCBI-GeneID:
112236647
NCBI-ProteinID:
XP_024261005
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Position
LG10:complement(71201334..71297598)
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AA seq
622 aa
AA seq
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MTGSPGISGQSLSPWRWLSRWGPVLLLVTMTTLLPGCCQACPPRCECSAQIRSVLCQRRR
LTGIPEGIPTETRLLDLSRNRLRWVEMGDLAPYPHLEEVDLSENLIATLEPNAFANLQSL
RVLRLRANQLKLVPMGAFAKLVNLTTLDLSENKLVILLDYTFQDLRSLRHLEVGDNDLVY
ISHEAFSGLLGVEDLTIERCNLTSISGQTLSYLRSLVTLRLRQLSIPALEDHNFRKLANL
RGLEIDNWPYLEYISPLSFQGLDLYWLSITNSNITSVPSSSFRNLIHLTHLNLSYNPITT
LEPWAFRDLLRLKELIMVNTGLATVEPHSLGGLRQIRVLNFSSNDLQTLEEGSFHSVNSL
ETLRVDGNPLLCDCRLLWILQRRKTLNFDGRVPVCAGPVEVQGNSLSTFTDSALFDHFTC
QKPKIRNRKLQQVTAREGQPVSFLCSAVGEPAPNIMWISPQRRLITAKSNGRITVLPGGT
LEIRYAQVTDSGTYMCIASNAGGNDTYFAMLTVRGAPLDASSAFFANRSMYGGEFFNDTN
LNSTRVFLKFTLDLTTILVSTAMGCITFLGVVLFCFLLLFAWSRGRGQRKNNFTVETPFR
KAEGPAAVGGAGGARKFNMKMI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgactggctccccgggcatcagtgggcagtccctgtcaccatggcggtggctgagtcgc
tgggggccggtcctgctgctggttaccatgacaaccctactgccaggttgttgccaggca
tgccctccacggtgcgagtgctcggcccaaatccggtccgtcttgtgccagcggcggcgg
ctcactggcatcccagagggcatccccacggaaactcgcctcctggacctcagccggaac
cgtctccgctgggtggagatgggtgacctggcgccgtatccgcaccttgaagaagtggac
ctgagtgagaacctcattgccacactggagcccaacgcgttcgccaacctgcagagcctc
cgggtgttacggctgagggcgaaccagttgaaacttgtacccatgggggccttcgccaag
ctggtcaacctgaccacgctggacctgagtgagaacaagctggtgattctgttggactac
accttccaagacctgaggagtctaagacacctggaggtgggagacaatgacctggtctac
atctctcatgaggccttctccggcctgctaggggtggaggatctgaccattgaacgctgc
aacctgacttccatctctggccagacgctgtcctacctacgcagcctggtcactttgcga
ctacgccagctcagcatccccgccctggaggaccataacttccgtaaactggccaacctc
cgggggctggagatcgacaactggccttacctggaatacatctcccccctgagcttccag
ggtctggacctgtactggctgtccatcaccaacagcaacatcacctctgtcccctcgtcc
tccttcagaaacctgatccacctcacccatctcaacctgtcctacaaccccatcaccacc
ctggagccttgggccttcagggacctgctgaggctcaaagagctgatcatggtgaacaca
ggcctggctacggtggagccccactccctgggaggcctcagacagatccgggtcctcaac
ttctcctccaatgacctccagactctggaggagggatcgttccactctgtcaacagcctg
gagacgctgcgggtggatgggaacccactgctgtgtgactgccgtttgttgtggatcctg
cagagacgcaagaccctcaactttgacggcagggtgcctgtgtgcgctgggccggtggag
gtgcaggggaacagcctcagcaccttcaccgactcagcgctctttgatcacttcacctgc
cagaagcccaagatacgcaaccgcaagcttcaacaggtgacagctcgtgagggccagcca
gtgagtttcctctgcagtgccgtgggagagcccgcccccaacatcatgtggatctcccct
cagcgccgactaatcacagccaagagcaatggtcgcatcaccgtcctcccaggagggacg
ttggagatccgctatgctcaggtcaccgacagcggcacctacatgtgcattgccagcaat
gccgggggcaatgacacttactttgcgatgctcacggttcggggcgcgccgctggatgcc
tcgtcggccttcttcgccaaccgctcgatgtacggcggcgagttcttcaacgacacaaac
ctgaatagcactcgcgtcttcctcaagttcaccctggacctgaccaccatactggtctcc
acagcgatgggctgcatcaccttcctgggcgtggtgcttttctgtttcctgttgttgttt
gcatggagccgggggcggggccagcgtaagaacaacttcaccgtcgagacccctttccgg
aaggccgagggaccggcggcagtgggtggcgccggaggtgcccggaaattcaacatgaag
atgatatga
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