Oncorhynchus tshawytscha (Chinook salmon): 112236710
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Entry
112236710 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: AT-hook DNA-binding motif-containing protein 1
KO
K22592
AT-hook DNA-binding motif-containing protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112236710
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
112236710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4683
Motif
Other DBs
NCBI-GeneID:
112236710
NCBI-ProteinID:
XP_042166324
LinkDB
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Position
LG31:31158257..31163349
Genome browser
AA seq
1275 aa
AA seq
DB search
MQIYTDLQMHTPADTHTHLAANTHMDAHTHSDSAGPEQPRTVSSPETHTRSPQRQVLLPV
THSACTNQQVASSPCSPLPPPSANRDRPPAISPAHIGPTPLDLSKPSRAIGPNPTGPSLI
GPSGSNPSTIGPDPIDPSPVSVEGERKYALRSSGRPRFPCQLRKSSRIRRSTEDGERRGG
RESEREEEMAEEEEEEEKERVSVHVKVERPTVEEGLPATSKPADSAIPVAPHPSTRPTPR
PTPHPTSHYAPRPAPKPRTSTKPQPRPSTNAKPKAQPRPSMKASPKSSPRPANNPRPANN
LSPCPSINTVPQPTVKKEVPDDLVPPTKQKRRFVGVRRIVVKVARIPVNLSRRQKSYKIS
SMETVVGPEKGGASGEGGLEGAEGVTSVVREPTALLRMKNNGKNVMVMFPPGELPVILKR
RRGRPPKQVVPGMPDKTGGNFAVASGNGEPKKPRRRRRAKLPSPQPSYVNDTNDVKTEYG
DVLSKLAFLNHQTPATGRCSPPRCWTPSEPDSFHTPSNNPGISTLLHRLTGFRRRGGRGG
GVGGRGGGAGGAGCESFKSSFSDFFETIGKKRKVTPALSEPGLPKKRGKGGGGRGGGLQG
EMGAGGEGWKPMRKRRSCKNGVLKGEAGGQLEQDWSNGEGVWEDDRGGERERGPGAYQAC
GSLRGDFLPCEGGRAYGSPGGSREGGGGDEVQGLFAGYFRSLLDSDDSSDLLDISSSRPD
PRKPLPTPGYDSSSTAPGPGSRWSPAFPKRSPKGEARENQTQVSSSSSSRPPYSYYLSQN
SPTTSSFPKSTPPSLSLPRSPSSPHPSSYGHYPSGYSSSSPAGGSAAPQRPTDCSFAAYG
AAGLDKASTVPPVGQGQMGYSNFSKRGYGGYPGQVGPSSPGGGGYMAMAKNNPFHSSSSP
EGYRHYPSNQWNCKQGSSGWMWDSLAHHYPGGYSDYVTPGPSEPKDILDISNYTPQKAKR
QPFLESLSESSSDSSHLGVTGSGGGVSTGGGGGGSGSGSGGGAYRQGGGRESLPIGGEGG
QGQSSLSSLEKLMMDWHESASGPSYNWSQNVLFQGQGKPGRGRRKRNAAEPQMEKEGGGG
PEPPPDSPTSPPAQTQSHTSTQGSGAKRSGIGGRQGRGARGGRGRLCPSPRERPPGWKKG
KAAGGGDGGGGGTAQGGLFQEGLDYFSGDSSSLSPLPTPALHLGYPPEPCEYPSPTPYSA
HPSTPSSEERYPTLFPGEASSSSLSPGMTSTSSSYPPKLSPPPALPPPLTPAPPPPPSPR
PAPNRHGYWPTVEQR
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atgcagatttacacggatctccaaatgcacacacctgcggacactcacacacacctagcc
gctaacacacacatggatgctcacacacactcggactctgccggtccagagcagcccaga
actgtttcatcaccagagactcacaccagatcacctcagcgacaggtcctcttgcctgtc
actcattcagcctgcaccaatcagcaagttgcttcctctccctgcagcccgcttcctcca
ccctctgcaaacagagacaggcccccggccattagccctgcccatattggaccaacacct
ctagatctctctaaaccctcaagagctattggcccaaatcctacaggtccttctcttatt
ggtccatccggttcaaacccttctactattggcccagaccctatagatccctcccctgta
tctgtcgaaggagagaggaagtatgcgctccgtagctccggtcgacctcgcttcccctgc
cagctacgcaagtcatcccgcatccgccgatccaccgaggatggagagaggaggggaggg
cgggagagcgagagggaggaggagatggcagaggaggaagaagaggaggagaaagagagg
gtgagtgtacatgtaaaggtagagcgccccacagtggaggagggtttacctgcaacctcg
aagcctgctgactcagctatacctgtagcaccacacccttcaacacgccctacaccacgc
cctacaccacaccccacctctcactacgccccccggccagcgcccaaacccagaacttca
accaaaccccaacctagaccttcaaccaatgccaaaccaaaagcccaacccagaccatcg
atgaaagcctcgcccaaatcctcgcccagaccagcgaacaatcccagaccagcgaacaat
ctttcgccctgtccatcgatcaataccgtgccccagccgacagtgaagaaggaggtgcct
gatgatctagttcctcccactaaacagaaacggcggttcgttggtgtgagacgtatcgtg
gtgaaggtggctcgtatcccggtgaacctcagccgacgccaaaagagctacaagatttcc
tccatggagaccgttgtcggaccggagaagggcggggccagtggagagggggggttggag
ggagcagagggggtgacatcggtggtccgagagccaactgcgctccttcgcatgaagaac
aatgggaagaatgtgatggtcatgttcccgcctggagaactcccagtgatcctgaaacgc
agacgtggccgacctcccaaacaggttgtaccgggaatgccggataaaacaggtgggaat
ttcgccgttgccagtgggaacggcgagcccaagaaacctcgtcggcgccgacgggccaag
ctcccatctccgcaaccgtcgtacgtgaacgacaccaacgacgtcaagacagagtacgga
gacgttctgtccaaactggcgttcctaaaccaccaaacgcctgccaccggccgctgctcc
ccaccacgctgctggacacccagcgaaccggatagctttcacacgccgtccaacaaccct
gggatctccaccctgctccaccgactcacagggttcagacgcaggggagggaggggtggt
ggcgtagggggcaggggaggaggagcaggaggggctgggtgtgagagcttcaagagctcc
ttcagtgacttcttcgagacgatcgggaagaaaaggaaagtgacccctgctctgtcagaa
ccagggttacccaagaaacgagggaagggtggagggggcaggggaggagggttgcagggg
gagatgggagctggaggtgaggggtggaagccgatgagaaaacgacgctcgtgcaagaat
ggggttctgaaaggggaggcaggaggtcagctggagcaagactggtctaatggtgaaggt
gtctgggaggatgaccggggaggggagagggagagagggccgggggcgtaccaggcctgt
ggttccctgaggggggacttcctgccctgtgaggggggaagagcatacggcagccctggg
ggcagcagagaaggtggaggaggtgatgaagtgcagggtttgttcgccggatattttcgc
tccctgctcgactcagacgactcctccgacctcctggatatctcctcctctcggcctgac
cccaggaaacctcttcccaccccgggctacgactcctccagcactgcccccggcccaggt
tctcgctggtccccagccttccccaagcgcagccccaaaggagaggcaagggagaaccaa
acccaggtctcttcatcctcctcttccagacctccttacagctactacctttcccagaac
tcccccaccacttcctcctttcccaagtccacccctccctccctctctctgcctcgctct
cccagttccccccatccctcctcctacggtcactacccgtccggctattcctcctcctct
cctgcggggggcagtgcagcaccacagagacccacagactgcagctttgcagcctacggg
gcagcagggctggataaagcctccacagtcccccccgtgggccagggtcagatgggctat
tccaatttttccaagcgtggatatgggggctaccctgggcaggttggaccatcctctcca
gggggaggggggtatatggccatggccaagaacaaccccttccattcctcatcatctcca
gagggttacagacactacccctccaaccagtggaactgcaagcagggctccagtggctgg
atgtgggacagtctggctcatcattacccaggaggctacagtgactacgtcaccccgggc
cccagcgagcccaaagacatcctggacatctctaactacaccccacaaaaggccaagcga
caacccttcctcgagagcctatcagagtcctcctctgactcatcccacctgggggtcacc
gggtcaggaggcggggtcagtaccggaggtgggggcggaggctcgggttcaggttccgga
ggtggggcttacaggcagggtggaggcagggagtctcttcctattggtggagagggaggt
caaggccagtccagcctatcaagtctggagaagttaatgatggactggcatgagagcgcc
tcaggcccctcttacaactggagccagaacgttctcttccaggggcagggaaagcccggg
cgggggcgcaggaaacggaatgctgccgaaccccaaatggaaaaggaggggggtggtgga
ccggagccccccccagactctcccaccagccccccagcccagacacagtcccacacctca
acccagggctctggtgccaaacgcagtgggattggggggcggcagggcaggggggcgagg
ggaggcaggggaaggctgtgcccgtccccaagagaacgccccccagggtggaagaagggg
aaggctgctgggggtggggatggaggaggagggggtactgctcagggggggttgttccag
gaaggccttgactacttcagtggagacagcagcagcctctccccccttcctacccctgcc
ctacaccttggttacccccctgagccctgtgagtacccctccccaactccttactccgcc
cacccctccaccccgtcctcagaggagcgttacccaaccctcttccctggcgaggcctca
tcctcctctctgtcccctggaatgacttccacatcctcctcctatcctcccaaactatcc
ccccccccagccctacctccccctctcacccctgctcctccccctcctccttctccccgt
cctgctcccaatcgccacggttactggcccactgtggaacagcgctga
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