Oncorhynchus tshawytscha (Chinook salmon): 112236719
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Entry
112236719 CDS
T05605
Symbol
rbb4l
Name
(RefSeq) histone-binding protein RBBP7 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03082
ATP-dependent chromatin remodeling
otw03083
Polycomb repressive complex
otw04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112236719 (rbb4l)
03083 Polycomb repressive complex
112236719 (rbb4l)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
112236719 (rbb4l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112236719 (rbb4l)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
112236719 (rbb4l)
Histone modification proteins
HAT complexes
HATB complex
112236719 (rbb4l)
HDAC complexes
Sin3A-HDAC complex
112236719 (rbb4l)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
112236719 (rbb4l)
PRC2.2
112236719 (rbb4l)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
112236719 (rbb4l)
Heterochromatin formation proteins
Other heterochromatin formation proteins
112236719 (rbb4l)
Chromatin remodeling factors
NuRD complex
112236719 (rbb4l)
NuRF complex
112236719 (rbb4l)
NuRF complex (fruit fly)
112236719 (rbb4l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
WD_LRWD1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
eIF2A
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_RIG_1st
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
112236719
NCBI-ProteinID:
XP_024261086
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MADKEVYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVNRPDGKDY
AVHRLVLGTHTSDEQNHLVIASVQVPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECSPDLRLRGHQKEG
YGLSWNPNLSGNLLSASDDHTICLWDIGAGPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDA
EDGPPELLFIHGGHTAKISDFTWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDTPAS
ELEGQGS
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcggataaagaagtgtacgacgatgcagttgaggagcgggtgatcaatgaagaatac
aaaatctggaagaagaatactccttttctctatgacctggtgatgacccacgcgctggag
tggcccagtctcactgtgcagtggctacctgacgtcaacaggccggatggaaaggactat
gcggtccacagactggtactgggaactcacacgtcagatgagcagaatcacctggtgatc
gccagcgtacaggtccccaacgatgacgcccagtttgatgcttctcactacgacagtgaa
aaaggagcagagtttggaggttttggatccgtgagtggaaagatagagattgagatcaag
ataaaccacgagggtgaagtgaaccgggccaggtacatgcctcagaacccctgcatcatt
gctaccaagacccccacctcagacgtactggtctttgactacaccaagcacccttccaaa
ccagaccccagtggtgagtgcagcccagacctgcgcctgcggggccaccagaaggagggc
tacggcctgtcctggaaccccaacctcagtggcaacctgctcagtgcttctgatgaccac
acgatctgcctgtgggacatcggtgctggtcctaaggaggggaagatagtggatgctaag
acaatcttcaccggtcacactgcagtggtggaggacgtgtcctggcacctactccacgaa
tcactgtttggctctgtggccgatgaccagaaactgatgatctgggacacacggtccaac
aacacgtccaagcccagccatgcagtggatgcccacactgcagaggtcaactgtctgtcc
ttcaacccctacagcgagttcatcctggccaccggctctgcagacaagactgttgctctc
tgggatctgcgtaacctcaaactgaagctccactcgtttgaatcgcacaaggatgaaatc
ttccagcaggtgcaatggtcccctcacaacgaaaccattctggcttcaagcggaacagat
agaaggctcaacgtatgggatctcagtaaaatcggagaggaacagtctgctgaagatgca
gaggacggacctccagaactcctgttcatccatggaggacacacagcgaagatttctgat
ttcacatggaaccccaacgagccatgggtcatctgctccgtctccgaggataacatcatg
caggtttggcaaatggctgagaacatctataatgatgaggagcctgacacccctgcttca
gagctggagggtcaagggtcgtaa
DBGET
integrated database retrieval system
