Oncorhynchus tshawytscha (Chinook salmon): 112236744
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Entry
112236744 CDS
T05605
Name
(RefSeq) run domain Beclin-1-interacting and cysteine-rich domain-containing protein isoform X1
KO
K19330
run domain Beclin-1 interacting and cysteine-rich containing protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112236744
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112236744
Membrane trafficking [BR:
otw04131
]
Autophagy
Other autophagy associated proteins
Others
112236744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUBC_PIKBD
RUN
CMD
UPF0561
Motif
Other DBs
NCBI-GeneID:
112236744
NCBI-ProteinID:
XP_024261121
LinkDB
All DBs
Position
LG05:complement(42405770..42430084)
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AA seq
993 aa
AA seq
DB search
MEITAEAEAEERRREHWKLLSSLKTTVEGLVSTNNPNVWSRYGGLQRLHKDMNHILSHGL
KHEQVYYKQKDYWPFVCCVRHISPHLASHIEQFSKLEPVQNRGVQSVGEGYKAERWLLHS
LQVHLLSAQLRPLLKHQEHTRKYYNEDAFLLKEPHVTAMFQYLEAVEQNNPRLLALVDTV
KLSTLKGPPCVGGLLKSQSLCELPGAGGGWRAGLGKSQGPPREELNHRLTTSQCSLSHRD
RGHTLNSINTGVISERNSDSIPSASAPGAPWGCVSGSGGEGERGVTPPRPSAAVPHIALT
EPASPGPAHSDTLDSGEGDDGPEYLAIGNLVQRCNRRDSQSSTPISESNSKPSGGGASGG
EVPVQPPTRSSLTLVPPPAPRRSSFSEGQRGQGRGGSRGHIRSMSDMGINHKHRHGGGHR
KITIIIEDPVAESLVGVDSCVKAYSPFSPVISDVSTPSSLYMESNGSQYSSVPDGMFRKP
SEGQSLISYLSEQDFGSCADLEKENAHFSISESLIAAIELMKCNLRRRREEEEDGDDSDS
EIQQLKQKIRLRRLQIRRTCLPPSQHLFHSTDSGGSCRSSQDSFHMSDSGSAEEVEECEL
RDGCEGQSLMAVSRSGLSLSLASLFSDADIKRSVTSSGRSFLTSESISPSFLQSNSAESV
AMGLLRQFEGMQLPAASELDWLVPEQDAPQKLLPIPDSLPISPDDGEHADIYKLRIRVRG
NLEWAPPRPQIIFNIHPTHKRKIVVAKQNYRCAGCGTRIDPDYIKRMRYCEYLGRYFCQC
CHENAQAVVPGHVLRKWDFSKYYISNFARDLLGKIAGDPLFNPNDINSGLYKKNKALETV
RVLRVQLFHMKNLFKTCRLAKDVLDHFDSLPGHLTEDLHLFSLNDLSAVRNGVLPTRLRE
LLKLGSAHVAGCVLCQAKGFVCEFCGNDKDIIFPFELNKCTRCEECKACFHSKCFRAGKE
CPRCQRLAERRERMARKNMEEQEDKEEDEGGGS
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atggagattacggcggaggctgaagccgaggaacgcaggagggaacactggaagctgctc
tccagtctaaagaccacggtggagggcctggtgtccaccaacaaccctaatgtgtggtct
cgctacgggggtctacagcggctgcacaaggacatgaaccacatcctcagccacggcctc
aagcacgagcaggtgtactacaagcagaaagactactggccctttgtgtgttgtgtccgc
cacatcagccctcacctggcctcacatatagaacagttcagtaagctggagcccgtgcaa
aacaggggtgtacagagtgttggggaaggctacaaggccgagcgctggctattgcacagc
cttcaggtccatctgctctccgcccagctcagacccctgctcaaacaccaggaacacacc
cgcaagtactacaacgaggatgcttttctcctaaaagagccccatgtgacggccatgttt
cagtatctggaggccgtggagcagaacaacccccgtttgctggcactcgttgacactgtc
aagttgtccactctgaagggccctccgtgtgtgggaggcctgttgaagagccagagtctg
tgtgagctgcctggggccggtggaggctggagggccgggctgggcaagagccaggggccc
cccagggaagagctcaaccacaggctcaccacctcccagtgctccctctctcaccgagac
agaggacacacactgaacagcataaacacaggggtcatctcagagaggaactcagactcc
attccatcagccagcgccccgggggccccttgggggtgcgtgtcagggtccgggggggag
ggcgagaggggtgtgactcctccccgcccctcggcagctgtcccccacatcgccctgacc
gagcccgcctccccaggccctgcccactcagacaccctagactctggcgagggcgacgac
ggcccagaatacctggccatcggtaacctggtgcaacgctgcaatcgccgtgactcccag
agctccacccccatcagcgagtccaacagcaagcccagcgggggtggcgcatcaggtggc
gaggttccggtccagccccctacgcggagctccctgactctggtcccgcctcccgcaccg
cgaaggtcatccttctcggagggacagagggggcagggtcgcgggggcagcagggggcac
atccgctcgatgtctgacatggggatcaaccacaaacatagacatggagggggccacagg
aaaatcaccattataatagaggaccctgtagcagaatcgttggttggagtagacagctgt
gtcaaggcctacagccccttctcccctgtcatcagtgatgtcagcacacccagctccctc
tatatggagtcaaatggctcccagtacagcagtgttccagacggcatgtttcggaagccg
tcagaaggccagagcctcatcagctacctatcggagcaggactttggcagctgtgctgac
ctggagaaggagaatgcccacttcagcatctctgagtctctgattgccgccattgagctg
atgaagtgcaacctgcggaggcggcgggaggaggaggaggatggcgacgacagtgactca
gagatccagcagttaaaacagaagatccgcctgcgcaggctgcagatccgtcgcacctgc
ctgccgccctcacagcacttgttccactccacagacagcggaggctcctgcagaagctcc
caggattcctttcacatgtccgactcaggctctgctgaggaggtggaggagtgtgagctg
agagatggctgtgagggccagtccctgatggcggtgtcaagaagcggcctctccctgtcg
ctcgcctccctcttctcagatgcagacataaagcgcagtgtgacgtccagtggccgctcg
ttcctcacctcagagtctatctctccgtcgttcctccagtctaactcggctgagtcggtg
gccatggggctgctcaggcagtttgagggcatgcagctccccgcagcctcggagctcgac
tggctggtcccagagcaagacgcaccgcagaagctcctgcccatccctgactccctgccc
atctctcctgatgacggggagcatgctgacatctacaagctgaggatccgggtgcgaggg
aacctagagtgggccccgccccgcccacagataatcttcaacatccaccccacgcacaag
aggaaaatagttgtggcgaagcagaactaccgctgtgcaggctgcgggactcgcatagac
ccagactacattaagcgaatgcgctactgcgagtacctgggccgctacttctgccagtgt
tgccacgagaacgcccaggcggtggtgccgggccacgtgttgaggaagtgggacttcagc
aagtactatatcagcaacttcgcccgggacctgctgggcaagatcgccggagaccccctg
ttcaaccccaacgacatcaacagtggcctctacaagaagaacaaagccctggagactgtc
cgggttttgagggtccaactattccacatgaaaaacctattcaagacatgccgcctagct
aaagacgtgctggaccattttgacagcctcccaggtcacctgactgaggacctgcacctg
ttctccctcaacgacctcagtgctgtgcgcaacggagtgctgcccacccggcttcgagag
ctgctgaaattgggttccgcgcacgtggctggctgtgtgctctgtcaggccaagggtttt
gtgtgtgagttctgcggcaacgacaaagacatcatcttccctttcgagctgaacaagtgc
acacgctgcgaagagtgcaaggcgtgtttccacagcaaatgtttccgggcaggcaaggag
tgcccgcgatgccagcgcctggcagagaggcgggaaaggatggcacgcaagaacatggag
gagcaggaggataaggaagaggacgagggaggcgggagctag
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