Oncorhynchus tshawytscha (Chinook salmon): 112236748
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Entry
112236748 CDS
T05605
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112236748
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112236748
Membrane trafficking [BR:
otw04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
112236748
Endosome - Golgi transport
Arf GTPase associated proteins
112236748
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
112236748
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH
RhoGAP
ArfGap
RA
PH_11
PH_6
PH_8
PH_13
PH_9
Motif
Other DBs
NCBI-GeneID:
112236748
NCBI-ProteinID:
XP_042153573
LinkDB
All DBs
Position
LG14:50490451..50586954
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AA seq
1233 aa
AA seq
DB search
MRRVPQPPPEIRSDFGDSSDDSEDPDQVYPKPQSVNMTDRDVFLPVPGWGKGRYSSLCSD
DELLDDDNEPISNRQSSWQDYGLSTLQESVYLPVTGRVLAQPPRDGPSPVLKMGWLDKNP
PQGSLYYQRRWVKLDVDYLRYFDNDKEVYSKRIIPTAAITGVTNVGEQKFEVVTTNRTFL
FRAESDFERNEWVSVLQNFTRGCQEGSRVITSSVPHSSMTPGSPLTPDQQGYLELRGLRS
KLYTVVSGDKVFLYKNMEDYRLGIGITSIDMNVGNVKDTDRRSFDLTTPYRIFSFLADSE
QHKDQWVEAMREAIGEALSNSEVANQIWAEPSNGCCADCGAAKPEWAAINLCVVVCKRCA
GEHRGLGPSISKVRSLKMDRRVWTEELIQVFLLLGNERLNRFWAANVPPSEALSPTSCSE
DRRRFISSKYRQGKYRKYHPLYGNQEELNNALCINVQCSDVLETLCLVFCGADVNCSTGQ
ADCPSPLSLALAHNQKLQAQFLSHNLNTELPRSEVTGVMEPQHYSPQHPVTHNGFLFKTA
SMARPITERKAREEFSRRWCMLNDGNFSYYESDKTSTPNGTLKSTEIVCLAVNTPEKHGY
DHTFELYSDSERIYLFGTDDPDSHREWVKSITKTFIPSNAEGLLRLAFERIGRLRYKDGL
NLQSPRVGWFALVGSSLHAYLEDSVEEEEIHLRKLQELSIQQENEVLVLVERGRTLYIEG
ERKLDFQGWCVSMQRAAGSAGDSLSQQQLTETDIPVIVDRCIDYITQCGLTSEGIYRKSG
VNSRVAALCEAFRRDARSVRLKEGEHQVDDVSNTLKRFFRESGEGLFTIQAASAWLSTPV
IPEESRKICQYQLLLSQLPRVNKATLRALVNHLYCVQRFAELNQMNLHNLAIVFGPTLFQ
SDGKDYTAGLVVEELIEHYTDVFEVDELQLKRQLDEITAIIKVREKLNHNSSVPASGSAG
DFICTVYLEEKKETTEQHVKIPGSMTAAELTCEILDRRKIQVREKDYWSCWEISQKEETE
RPLHHLERVLPIIHSLGTDSHLLVKKHLAMEAIRIYLASKVDVSKHGMVKFREERSILGL
GLNTGSFHDRYFILSTASLRMYKEVRSNRPEREWQVKNLRVYLGIKKKLRPPTCWGLTLI
NGSEKQEKPERQQWYLCCDTQTEMREWFSTFLTIQYDGNVWPADAVQTRVTRALPADTRH
GNVALIPLRGSENEMRNSVAAFTADPLGLFRDV
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgagaagagtcccccagccaccgcctgaaatcaggtcagattttggtgacagttcagat
gactctgaggatccagaccaagtttaccccaagccccagtctgtgaacatgacagacagg
gatgtgttcctgccggtgccggggtgggggaaggggcggtacagctctctctgcagcgac
gatgaactattggacgatgacaacgagccaatcagcaaccgtcagagctcatggcaggac
tatggtctgagtacgctacaggagagtgtctacctgccggtcacaggcagggtcctagcc
cagccccctagagatggcccctcccctgttctaaagatgggctggctggataagaaccca
ccgcaggggtctctgtactaccagaggagatgggtgaagctggatgttgactacctgaga
tactttgacaacgacaaggaggtatactctaagaggatcataccaacggctgccattacg
ggggtgaccaacgtgggggagcagaaatttgaggtggtcacaaccaaccggacctttctc
ttcagagccgagagcgactttgagaggaatgagtgggtgtcagttctgcagaacttcact
agggggtgccaggagggcagcagggtgattacttcatcggtcccacactcctcgatgacc
cctggttcacccctgacccctgatcagcagggctacctggagctgaggggcctgcgctcc
aaactctacacagtcgtctctggagacaaggtcttcctctacaagaacatggaggactac
cgtcttggcatcggcatcacgtctatcgacatgaacgtaggaaacgtgaaagacactgac
cgccgcagctttgatctgacaacaccctaccgcatcttcagttttctagcggattcagaa
caacataaagaccagtgggtagaagcgatgcgtgaagcgattggagaggctctgtccaat
agcgaggtggctaatcaaatctgggcggagcctagcaatggttgctgtgccgactgtggc
gccgccaaacctgagtgggctgccatcaacctgtgtgtggtggtctgcaaacgctgtgca
ggagagcaccgcggtttgggccccagcatctctaaggtgcgcagtctgaagatggacagg
agggtgtggacagaggagcttatacaggtgttcctgttgctgggtaatgagcgtctgaac
agattttgggcggcgaacgtccctcccagcgaggcgctgagtccgaccagttgcagcgaa
gaccgccgacgattcatcagctccaaatacagacagggaaaataccgcaaataccacccc
ctctacggcaaccaggaagagcttaacaacgccctgtgtataaacgtgcagtgcagtgat
gtcctggagaccttatgtctggtgttctgtggagctgatgtgaactgttctactggccag
gctgactgtccctcccccctctccctggcactcgcccacaaccagaaactacaggcccag
ttcctctcacacaacctcaacacagagctgcctcggtcggaggtgactggggtcatggag
cctcaacactattcaccgcagcaccccgtcactcacaatggcttccttttcaagaccgcc
tccatggcccggcctatcacggagcgtaaggccagggaggagttcagtcgtcgctggtgt
atgttgaatgatgggaactttagttactatgagagtgacaagacctccacgcccaacgga
accctgaagtctacagagatagtctgtctggctgtcaacacaccagagaaacatggctat
gaccatacatttgagctgtactcagactctgagcgtatctatctctttggcactgatgac
ccagacagccacagggagtgggttaaatccatcaccaagacgtttattccatccaatgca
gagggcctgttgaggctggcttttgaaaggattggccggctgcggtataaagacgggctg
aatctacagagcccccgggttggctggttcgctctggtcggctcctccctccatgcctac
ctagaggacagtgtggaagaggaggagatacacctacgcaaactacaggagctctcgatc
cagcaggagaatgaggtgctggttctggtggagagaggcaggactctgtacatcgagggg
gagaggaagcttgacttccagggttggtgtgtgtccatgcagagagcagcaggcagtgca
ggggactctcttagtcagcagcaactaactgagaccgacatccctgttatagtggaccgc
tgcattgactacatcacacagtgtggtctgacgtccgagggtatctaccgtaagagcggt
gtgaacagtcgcgtggcggcgctgtgcgaggcgtttcggcgtgatgcccgtagcgtgcgt
ctgaaggagggtgagcaccaggtggacgacgtgtctaacacactgaaacgcttcttcaga
gagtctggagagggactgttcaccatacaggctgctagcgcatggctcagcacacctgtg
atcccagaggagagcagaaagatctgtcagtaccagctgctgctaagccagctgcccaga
gtcaacaaggccacgctacgagccctggtcaaccacctctactgtgtgcagcggtttgca
gagctgaaccagatgaatctccataacctggctatagtatttggcccaacactgttccag
agcgacgggaaggattacacagctggcctcgtcgtagaggaactcatagagcactacacg
gacgtctttgaggtggatgagctgcagctgaaaagacagctggatgagatcacggccatc
attaaagtcagagagaagttgaaccacaactccagcgtccctgcgtcggggtcagcaggt
gacttcatctgtacagtgtacctggaggagaagaaggagacgacagagcagcatgtcaag
atccctggttctatgacggcagcagagctgacctgtgagattctggaccggcggaagatc
caggtcagagagaaagactactggagctgctgggagatcagccagaaggaggagaccgag
cgtccattgcatcatctggagcgtgtgttacccatcatccattctctgggtaccgactcc
cacttgctggtcaaaaaacatctcgccatggaggccatacgcatctacctggccagtaaa
gtggatgtgtccaagcacgggatggtgaagttccgggaggagaggagcattctgggattg
ggactgaataccggcagcttccacgaccgctacttcatcctgagcactgcctccctcagg
atgtacaaggaagtgcggagtaatcgtccagagagggaatggcaggtgaagaacctgagg
gtctatctaggcatcaagaagaaactacgaccacccacctgttggggtctgactctgatc
aatggaagtgaaaaacaggagaagccagagaggcagcaatggtatctgtgttgtgacact
cagacagagatgagggagtggttctccaccttcctcactatccagtatgatggtaacgtg
tggccagcggatgcagtacaaacacgtgtgacccgtgcgttgccggcagatacgcgtcat
ggtaatgtggcgttgattccgttgcgcggcagcgagaatgagatgcggaacagcgttgca
gctttcaccgccgacccgcttggcctctttagagatgtctga
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