Oncorhynchus tshawytscha (Chinook salmon): 112236765
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Entry
112236765 CDS
T05605
Symbol
shoc2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
112236765 (shoc2)
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Motif
Pfam:
LRR_8
LRR_4
LRR_14
LRR_LRWD1
LRR_9
LRR_13
LRR_NLRC4
Motif
Other DBs
NCBI-GeneID:
112236765
NCBI-ProteinID:
XP_024261144
UniProt:
A0AAZ3NNG9
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Position
LG02:complement(73603200..73631364)
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AA seq
581 aa
AA seq
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MSSTLGNKDKDWKEKDLKGGPTGGKEKEKEAKALAGLGSKDPKAKGKDAKEGKKDAGSAS
PAVAFSVDNTIKRPNPAPGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHMLPTSIKE
LTQLAELYLYSNKLQSLPSEVGCLSGLVTLALSENSLTSLPESLDSLKKLRMLDLRHNKL
REIPAVVYRVTSLTTLYLRFNRITAVERDIRNLAKLTMLSIRENKIKQLPAEIGELCNLI
TLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETIGNLASINRLGLRYNRLSAIPR
SLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSLN
MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDI
CGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNN
QLTTLPRGIGHLTNLTHLGLGENLLQHLPEEIGTLENLEELYLNDNPNLHSLPFELALCS
KLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtactttaggtaacaaagacaaagactggaaagagaaggacctgaaaggaggt
ccgacaggagggaaagaaaaggaaaaagaggccaaggctctggctggtttaggcagcaag
gatcccaaggccaaagggaaagacgccaaagaaggaaagaaggatgcaggttccgcgtcg
cctgccgtcgccttctccgtggacaacacgataaagaggcccaacccggcgccggggaca
cgcaagaagtccagcaacgccgaggtgatcaaagagctcaacaagtgccgtgaggagaac
tccatgcgtctggacctgtccaagcgttccatccacatgttacccacctccatcaaggaa
ctcacccagctggcagagctctacctgtacagcaacaagctccagagcctcccctcagaa
gtgggctgcctgtctggcctggtcaccttagccctgagtgagaactctctaaccagcctc
ccagagtccttggactccctgaagaagttgaggatgctggacctgaggcataacaaactg
agggagataccggcggtggtttaccgggtgacgtcgctgaccacactgtacctgaggttc
aaccggatcacggcggtggagagggacatccggaacctggcgaagttgaccatgctcagc
atccgtgagaacaagatcaaacagctgcctgccgagataggggagctctgtaacctcatc
accctggacgtagctcataaccagctggaacatctacccaaggagatcggcaactgcacc
cagatcaccaacctggacctacagcacaacgagctactggacctaccagaaactataggt
aacttggcaagcataaaccgcttgggtctgcggtacaaccggttgtcagccatccccagg
tcgctagccaagtgcagagaactggaagagctcaacctagaaaacaacaacatctctgtg
ttaccagaaggtctcctgtctagtctggtgaatctgaccagtctaaccctggcgaggaac
tgtttccagtcctacccagtgggaggaccctcccagttctccaccatctactctctcaac
atggagcacaaccgcatcaacaagatcccctttggaatcttctccagggccaaagtcctc
agcaaactcaacatgaaggacaaccagttgacgtctctgcctctagactttggcacgtgg
accagtatggtggagctcaacctggccaccaatcagctgacaaagatccctgaggacatc
tgcggtctcgtttcacttgaggtcttgatattgtccaacaatcttctcaagaagttgcca
catggtattggcaacttgaggaaactacgggagctcgacttggaggagaacaagctggaa
tcgctcccgaatgaaatcgcttacctgaaagatttacagaaactagtgttgaccaataat
cagctgaccacgttgccccgtgggatcggtcacctcaccaacctgacccacctgggtctg
ggagagaacctgctgcagcacctgccagaggagatcggtacactggagaacttggaggag
ctgtacctcaatgacaaccccaacctgcacagcctcccgtttgagctggccctgtgcagc
aagctgtccatcatgagcatcgagaactgtcctctcagccatctgcccccgcagatcgtc
gccgggggcccctccttcattatccagttcctcaagatgcaggggccctaccgggccatg
gtctga
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