Oncorhynchus tshawytscha (Chinook salmon): 112236780
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Entry
112236780 CDS
T05605
Name
(RefSeq) protein SOGA3 isoform X1
KO
K27704
microtubule cross-linking factor
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112236780
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
112236780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
ATG16
Fez1
KxDL
Dcc1
TSC22
Halo_GVPC
CCDC113_CCDC96_CC
Motif
Other DBs
NCBI-GeneID:
112236780
NCBI-ProteinID:
XP_042171785
UniProt:
A0A8C8GVF6
LinkDB
All DBs
Position
Unknown
AA seq
854 aa
AA seq
DB search
MNPASGGAADSRSQLDNSNRKLQQQRASSPAGGKDIGSKETPKSSTPSKIITSKQCGGGR
GNRGSSPVSTATSKDRLSSSSKGAASAAGAVPVQSDGAEIHTLTRAAAAAGSGRGAAEER
SSPSEDSRCTDISCLKGDTTRVVSDQPCSSKSPKLKNNNPRGGGGEGEASSTATGNKKSS
GKSSVGCGPGFWREGCLQSELIQFHLNKSLKKGGGKMKAKTPSPPEPVTETAEPEDLSPE
AIVNEPEPVPEPDQLFQEEIEKLEDENDELKTEIEEMRAEMDEMRDTFYEEDACQLQDMR
RELERANKNCRILQYRLRKAERKRMRFAQTGEVDGELLRALEQDLKVAKDVSVRLHHELE
NVEEKRTKTEEENEKLRQKLIEVEVTKQALQNQLEKAKELSLKRRGGRDVQKDKRIPQTP
IEEDNEDLKCQLAFIKEEAILMRKKMAKIDKEKDRLEHELQKYRSFYGDVDSPGPKGEAG
GPATTRESELKLRLRLVEEEANILGRKIVELEVENRGLKAELEDMRDRDEVAGGSAEHGC
SREQGEELRELRQQLQLVEDEAELLRRNLQDAEEDNNKVTGELNKLKYKEGSRHGAGGGG
GGAGAAADRAKVEVLQEELKAARLQINELSGKVMQMQYENRVLLSNMQRYDLASHLGIRA
SPRESDAESDGGDDASTSSRFPPHRKREGPIGGESDSDEVRNIRCMTPTRTLYSPEGRFL
PRSLKDRQQMVDIRIEAERLGRTVDRLIADTGTIMAEARVYMVSNGELYEEEGSTVREHE
LLYRITAQMKAFRKELQGFIDRLDVPKPEDKEEEEPLSMFQPIILLILILVLFSSLSYTT
IFKLVFLFTLFFVL
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgaaccctgcctcgggcggcgctgccgactcccgcagccagctggacaatagcaacaga
aagctgcagcaacagcgcgcttcctccccggctggcggcaaagacattggatctaaagag
acgccgaaaagcagcactccgtcaaagatcatcacgtcaaagcagtgcggaggagggaga
ggcaaccgcggcagctccccggtctccacggcaaccagcaaagacagactgtcttcttct
tccaaaggcgcggcaagcgcggcaggcgccgtccctgtccagtccgatggtgctgaaatc
catacgttgaccagggcggcggcggcggctgggagcggcagaggagcggcagaggagcgc
agtagtccgtctgaagactcgcgttgtactgatatatcgtgtttgaagggggatacaaca
cgggttgtttctgatcagccttgttcatccaaatctcctaaattgaagaacaataacccg
agaggagggggaggagaaggcgaggctagcagcacagcgaccggaaacaaaaagagctcc
ggcaagagcagtgtgggctgcggcccgggcttctggagagagggatgtttgcagtcggag
ctgatccagtttcacctgaataaaagcttaaagaaaggaggaggaaagatgaaggcgaag
acaccgtctccaccggagccggtcacggaaacggcggaaccagaggatctctcccctgag
gccatcgttaacgagcccgaaccggtacctgagcccgaccagctatttcaggaggagata
gagaaactggaggatgaaaacgatgaactaaagactgagatagaggagatgagagcagag
atggacgagatgagagacacgttctacgaagaggacgcctgccagctgcaggacatgcgt
cgcgagctggagcgagccaataagaactgccggattctccagtaccgtctgaggaaggcg
gagaggaagaggatgcggttcgctcagaccggagaggtagacggagagctactgagggcc
ctggagcaggacttaaaggtagcgaaggacgtgtcagtgcgcctgcaccatgagttggag
aatgtggaggagaaaaggacgaagacggaggaggagaacgagaaactaaggcaaaagctg
atagaggtggaggtgaccaaacaggccctgcaaaaccaactggagaaggccaaggagctg
tcactgaagaggagaggaggcagggatgttcagaaggacaaaaggattccacagactcca
atagaggaggacaacgaagatctgaaatgccagctagccttcatcaaggaggaagccatt
ttaatgaggaaaaaaatggctaaaattgacaaggagaaggaccggctggaacacgagctg
cagaagtaccgctctttctacggggatgtggacagccctgggcccaagggagaggctgga
ggaccagccaccacccgggagtcagagctgaaactgagactgagactggtggaggaggaa
gccaacatcctggggaggaagatcgtagagctggaggtggagaatagaggactgaaggct
gaactggaggacatgagagacagggatgaggtggcaggaggctcggctgagcatggctgc
agcagggagcagggagaggaactcagggagctgagacagcagctacagctggtggaggac
gaggcagagctacttaggaggaacctacaggatgcagaggaggacaacaacaaggtgacg
ggggagctgaacaagctgaagtacaaggagggctccaggcacggcgccgggggtggaggg
ggtggcgccggggcagctgcagaccgggccaaggtggaggtcctgcaggaggagctaaag
gctgccaggctacagatcaacgagctgagtggcaaggtgatgcagatgcagtatgagaac
cgggtcctgctgtccaacatgcagcgctacgacctggcgtcacacctgggcatcagggcc
agcccccgggaaagtgacgcagagagtgacggaggagatgacgcctccacctcatcgcgc
ttcccaccccaccgtaaacgagaaggccccatcggaggggagagcgactcggacgaggtg
cgtaacatccggtgcatgaccccaacccgcaccctctactcccccgagggccgtttcctc
ccccgcagcctgaaggaccgacagcagatggtagacatccgtatagaagcagagcggctg
ggccggaccgtcgacaggctgatagcagacaccggcaccatcatggctgaggcccgggtc
tatatggtctccaacggggagctttacgaggaggaagggagcaccgtcagggagcacgag
ttgttgtacaggatcaccgctcagatgaaggccttcaggaaggagctgcagggttttata
gacagactggatgtccccaagccagaggacaaagaggaggaggaaccactgtctatgttt
caacccatcattctgctcatcctcatcctcgtcctgttctcttcactctcctacaccacc
atcttcaaactcgtcttcctcttcactctcttcttcgtcctgtaa
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