Oncorhynchus tshawytscha (Chinook salmon): 112236934
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Entry
112236934 CDS
T05605
Name
(RefSeq) RUN and FYVE domain-containing protein 1 isoform X1
KO
K12482
RUN and FYVE domain-containing protein 1/2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112236934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112236934
Membrane trafficking [BR:
otw04131
]
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
112236934
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RUN
FYVE
FYVE_CARP1-2
zf-RING_5
HypA
Motif
Other DBs
NCBI-GeneID:
112236934
NCBI-ProteinID:
XP_042181900
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All DBs
Position
LG08:complement(76432201..76441722)
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AA seq
718 aa
AA seq
DB search
MADGVSETNTAAEESDAKEEDPKVLEVLPDSHPVGVSSDEQTSKDKPATESNWSTPILSL
ARKATETISSGVSYGAALRNATSSGSAASSLKCPTKQNSTENDTNANQYLPAVKDHMAVE
RSNLFSMMKLSIKGLIQSSLSLGRTLDSDYPPLQQFFVVLEQCLKHGLKVKKSFINQNKS
IWGPLELVQKLCPDSTDITTSARDLPGIKTGLGRARAWLHLALMQKKLSDYLKALLDHKY
LLVEFYDPGALMMGEEGTVIGGMLVGLNVIDANLCIKGEDLDSQVGVIDFSLYLKDPMTT
ETTKDDTKMTAILDQKHYIEELNRHLSCSVSDLQAKMDSIEKTNGKLIEELTAATDRINS
LREEQETLRHENETIVQSNQKKEEVTLEDSAVELETYRQTRQGLDEMYSVVWKQYQEEKR
IRQELERELELQIGLKQEMEMAMRLLEKDTHEKQDTLQALRQQLDQVKTLNLQMFHKTQD
CEREAQRKQEEEGQLEEKINQMKTTIKEMEQSPCIFRLQNSERDRRQSDQMDMRTELEGR
VDSLQKQLSDLDTLRLSLESDLCSEKKQRQAIQRALQREQDNSTELRTQLQQIQGLHTEL
QDVREEKQQLQQTCQEQETALQEMGLHLSQSKLKMEDFKEVNKALKGQAWLKDDEATQCK
QCQKEFSIARRKHHCRNCGDIYCNSCSTNELALPSYPRPVRVCDICHSLLLQRSISSS
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggccgacggagtaagtgaaacaaacacagctgctgaggaaagcgacgccaaagaagag
gaccccaaagttttggaagttcttccagacagccaccctgttggcgttagcagcgatgaa
cagacttcaaaagacaaaccggcgaccgagagcaactggtcaacaccgatcctgtcgctg
gcacggaaggcaaccgagacgatcagcagtggggtcagctacggtgcagcgttgagaaac
gccacatcttcgggatctgccgcgagctctctgaagtgtccgactaaacaaaactctacg
gagaatgacaccaacgctaaccaatacctaccggcagtgaaggaccatatggctgtggag
cgctccaacctgttcagtatgatgaagctgagtattaagggtctgatccagtcttctcta
agtctgggcagaaccctggactctgactaccctcctctgcagcagttctttgtggttctg
gagcagtgcctcaaacacggactgaaagtaaagaagtcattcatcaatcagaataagtct
atctggggtcctctggagctggttcagaagctgtgtcctgattctactgatattaccacc
agtgccagagacctgccagggataaagactgggttgggtcgggctcgggcctggctgcat
ctggccctgatgcagaagaagttgtctgactacctgaaagccctgctggaccataaatac
ctcctggttgagttctatgatccaggagcattgatgatgggggaggagggaacagtgata
ggagggatgctggtggggctaaacgtcattgatgctaacctctgtatcaaaggagaggac
ctggactcccaggtcggggtcatagacttctccttgtacctgaaggaccctatgaccact
gagaccactaaggatgatactaagatgacggccatattggaccagaaacactacattgag
gagctgaacagacacctgagctgctctgtctctgacctgcaggccaagatggactccata
gagaagaccaacggcaagctcattgaggagttgacagcagcgacagacagaattaactct
ttacgggaggaacaggaaacactgagacatgagaatgagaccatcgtccagagcaaccag
aagaaagaggaggtgaccctggaggacagtgcagtagagctggagacatacagacagaca
cgacagggcctggatgagatgtacagtgtggtctggaaacagtaccaggaggagaaacgc
atcagacaggagttggagagggagctggagctgcagataggactaaagcaggagatggag
atggccatgaggctgctggagaaagacacacatgagaaacaggacacactgcaagccctc
cgacaacaactggaccaggtcaaaaccctcaacctgcagatgttccataagacacaggac
tgtgagcgtgaggcccagaggaagcaggaggaagagggacagctggaggagaagataaac
cagatgaagactaccattaaggagatggagcagagcccatgtattttcagactgcagaac
tctgagcgtgatcgcagacaaagtgaccagatggacatgaggacagagctggagggcagg
gtagactccctacagaaacaactgtctgacctggacacactgaggctgagtctggagagt
gatttgtgcagtgagaagaagcagagacaggccattcagagagctctacagagagaacag
gacaacagcaccgagctacgcacccaactacagcagatacaggggctacacacggagctg
caggatgttcgtgaggagaagcagcagctccagcagacctgtcaggagcaggagacggcc
ttacaggagatgggcctacacctcagccagtctaaactgaagatggaggacttcaaagag
gtcaacaaagccctgaagggccaagcctggctgaaagatgatgaggctacacagtgtaaa
caatgccagaaggagttctccatcgctcgcagaaagcaccactgtaggaactgtggagat
atctactgtaacagttgttctactaacgagttggccctgccctcctaccctcgacctgta
cgagtctgtgacatctgccactcactactgctgcagaggagcatctcttcctcctga
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