Oncorhynchus tshawytscha (Chinook salmon): 112236938
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Entry
112236938 CDS
T05605
Name
(RefSeq) amyloid-beta A4 precursor protein-binding family A member 1-like
KO
K04531
amyloid beta A4 precursor protein-binding family A member 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112236938
Membrane trafficking [BR:
otw04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
112236938
Endocytosis
Clathrin-mediated endocytosis
LDLR adaptor proteins
112236938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PID
PDZ
PDZ_6
PDZ_2
DUF1435
Motif
Other DBs
NCBI-GeneID:
112236938
NCBI-ProteinID:
XP_042187235
LinkDB
All DBs
Position
LG12:9450695..9586507
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AA seq
864 aa
AA seq
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MSRRNNHLHQAHSLFTLYSHNQMSRRRMRGRERGREGDDYALARSASTESGFHTHTDRAE
GDAVMALDPEAEDDCGTYEVTLRPEAEGYTESAESEQPHPNLNLNYPPLPPPLPREPLPD
VGRPPSQEEAEETLNPGGGYSNYVYTQPLYRRGGGASRKGGRDCSVEEGVEPEDEAYSEA
YDYSLTEHVYEEIGDALSSAAKVAEPMDANENLQQRKAGFHLFEGREGGGDYRQQEAVGS
RLHHYDERSDGESDSPEKEAEFAPYPRADSCDQDGEEDIDMIVAEVRESLSSQSLERAAA
GLREGGEEEDMMEGGEEEEGEWPESEHAHNSQSDAPTDSTYRKGEIEGEGESGVRNSREK
RDAISLAIKDIKEAIEEVKTRTVRSPYTPDEPKEPIWVMRQDLSPTAECCDLQPSLGGDS
PSPGSDSQASPQGAESSVRTPMLEGSDSFESPPPSTKESRRSLASFPTYVDVPGPCDPED
LIDGIIFAANYLGSTQLLSDKTPSKNVRMMQAQEAVSHIKTAQKLAKNKMKTPEGEAQPM
TEVDLFISTQRIKVLNADSQETMMDHTLRTISYIADIGNIVVLMARRRMPRPDSTDSVEV
SEPDQEEKQSQYKMICHVFESEDAQLIAQSIGQAFSVAYQEFLRANGINPEDLSQREYSD
LLNTQDMYNDDLIHFSKSENCKDVYIEKQKGDILGVVIVESGWGSILPTVIIANMMHAGP
SEKSGRLNIGDQIMSINGTSLVGLPLSTCQTIIKGLKNQSRIKLNIVRCPPVTTVLIRRP
DLRYQLGFSVQNGIICSLMRGGIAERGGVRVGHRIIEINSQSVVATPHEKIVHILSNAVG
EIHMKTMPAAMYRLLTAQEQPVYI
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgagccggaggaacaaccacctccaccaggcccacagcctgttcactctctactcccac
aaccagatgagccggaggaggatgagggggagagagagggggagagagggtgatgattat
gcattagctcgttctgctagcacggaaagcggtttccacacacacacagaccgggcggag
ggcgacgccgtcatggcactagatcctgaggcagaggacgactgcggtacctacgaggtg
acgcttcgcccagaggcagagggatacacagagagtgctgagtcagagcaaccccacccc
aacctgaacctcaactacccccctctgccccctcccttaccccgggaacccctaccagat
gttgggagaccccccagtcaggaggaggcagaggagaccctgaaccctggaggaggttac
tccaactacgtgtacacccagcctctctaccgccgtgggggaggggccagcagaaaaggg
gggcgggactgcagcgtggaggaaggggtggagccagaagacgaggcgtattctgaagcc
tacgactactccctgacagaacacgtctacgaggagatcggcgacgctctctcttctgcc
gcaaaggttgcagagcctatggacgccaatgagaacctccagcagaggaaagcggggttc
catctgtttgaggggcgggaaggaggcggggactaccgacagcaggaggcggtggggtca
cggctccaccactacgatgaacgctcggacggggagtcggacagcccggagaaggaggcg
gagtttgctccgtacccacgggcagacagttgcgaccaggacggggaagaggacatcgac
atgatcgtagccgaggtcagagagagtctcagctctcagagtctggagagagctgctgcc
gggctacgggagggaggagaggaagaggacatgatggaaggaggagaggaagaggaggga
gagtggcccgaatccgaacacgctcacaattctcaatccgatgcgcccacagactccaca
taccgcaagggagagatagaaggagagggagagtctggggttcgtaacagtcgtgaaaag
agagacgccatctccctggccataaaggacatcaaggaggccatagaagaggtgaagacc
aggacggtgaggtcaccctatacccctgatgaacctaaagagcccatctgggtgatgaga
caggacctgagccccaccgctgagtgctgtgacctgcagccctcactaggtggcgactca
ccttctccaggatcagactctcaggcctctcctcagggggcggagtcttccgtccggacg
cccatgctcgaggggagtgacagcttcgagtctccaccgccctccactaaagagtccagg
agaagcctcgcctccttccctacctatgtagacgtcccgggtccgtgtgacccagaggac
ctgatcgatgggatcatatttgctgctaactacctgggctccacccagctgctgtctgac
aagacgccctccaagaacgtccgtatgatgcaggcccaggaggccgtcagccacatcaag
acggcccagaaattagccaaaaacaagatgaagactccagagggtgaggcccagcccatg
acagaggtggatctcttcatctccacccagaggatcaaagtcctcaatgctgactcccag
gagaccatgatggatcacaccctgaggactatctcatacatcgctgacatcggcaacatc
gtggttctgatggcgagacgccgtatgccccgcccagactcaacggacagtgtggaggtg
tctgaacctgaccaggaggagaaacaaagccagtacaagatgatttgtcacgttttcgag
tcggaggatgcccagctgatagcccagtctataggccaggccttcagtgtggcgtaccag
gagttcttgagggccaatggcatcaacccagaggatctgagtcagagagaatacagtgat
ctgctcaacactcaggacatgtacaatgatgacctcatacacttctccaagtctgagaac
tgcaaagatgtttacattgagaagcagaagggtgacattctgggcgtggtgattgtggag
agtgggtggggctccatcctgcccacagtcatcatcgccaacatgatgcatgctggtcca
tctgagaagtctggtcgtctgaacatcggagaccagatcatgtctatcaacgggaccagt
ctggtaggactacccctgtctacctgccagactatcattaagggtctgaagaaccagtct
cgtatcaagctgaacattgtaaggtgtcctcccgtaaccacggtgctcatcagacgacct
gacctcagataccagctgggcttcagcgtacagaatggcattatctgcagccttatgcga
gggggcatcgctgagaggggaggagtcagggttggccaccgcatcatcgagatcaacagc
cagagcgtagtggccacaccccacgagaagattgtccacatcctgtccaacgccgtggga
gagatccacatgaagacgatgccagctgccatgtaccgcttgctaactgcccaggagcaa
cccgtttacatctag
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