Oncorhynchus tshawytscha (Chinook salmon): 112236978
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Entry
112236978 CDS
T05605
Name
(RefSeq) iroquois-class homeodomain protein IRX-6-like isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112236978
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
112236978
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
112236978
NCBI-ProteinID:
XP_042177139
UniProt:
A0A8C8HZY9
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Position
LG04:73519942..73525307
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AA seq
538 aa
AA seq
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MITKEAAMSFSQFGYPYNATSQFFVSANPSTTCCDSISRSVSDGTSGTQTPATFCCPSYE
NRLLASTRTELNAALGMYSSPYAAAAAASQNYASYFPYSAEPSAAIYSSLNPQYEMKDGT
GTLHSGITQPATYYPYDHSLGQYQYDRYGTMDFNGSARRKNATRETTSTLKTWLYEHRKN
PYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWSPKNKAGDDRKDDLDKSDQ
DCVTKDSSECKDEKDLHLSDLEDMEDEDCDKLDSDCEKMAPRGPEEQQDLHRAMSSGGVG
SGGLPKRDCSSELSLSLPNSFHHSFPCGIKSLPTLPSLPTMPSDFLDPLVTSKPPSTTTT
IPTGTHTVSLSHFEVSDRDKPRIWSLARTAATGVILGSAHHGAPELRTGSMLGDCHLQGT
RLPVTGTRQCGPLRGLQDPTNISNAENPFQEGPLLQSKVYSAGSYNHKALQLHCSSYPAL
SDSCQYSTIEGFSSGKAETEPSELSDTCVTLQDDKVTAFRPVMKRLMDTQSLHSGTFI
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgataacaaaagaagcagctatgtctttctctcagtttggatatccttataatgcaact
tcacagtttttcgtgtcggcaaaccccagtacgacttgctgcgattcgatttccaggtcg
gtctctgacgggacgagcggtacccagactcctgctaccttctgctgcccttcctacgag
aaccggctcctggccagcacacggacggagctcaacgcggcactagggatgtatagctcg
ccctacgctgccgcggccgccgccagccagaactatgccagctacttcccctacagcgcc
gagccctccgctgctatctactcatctctgaatccacagtatgaaatgaaggatggcaca
ggcactctgcattctggtataactcaacctgccacctactatccttatgaccactcactg
ggccagtaccaatatgacaggtatgggactatggactttaatgggtcagccaggaggaag
aatgccacacgtgagaccaccagtaccctgaagacatggctgtacgagcacaggaaaaac
ccctaccccaccaagggcgagaagatcatgctggccatcatcaccaaaatgaccctcacc
caagtttccacctggttcgccaacgccaggaggaggctaaagaaggagaacaagatgacc
tggtcaccaaagaataaggctggggatgacaggaaggacgacctggataaaagtgaccaa
gactgtgtcaccaaagattccagtgagtgtaaagatgagaaagaccttcatctgagtgac
ctggaggacatggaggacgaggactgtgacaagctggacagtgactgtgagaagatggca
cccaggggccctgaggaacagcaggacctccacagggccatgtccagtggtggtgttggc
tctggaggccttccaaagagagactgcagctcagagctctccctctccttgcccaacagc
ttccaccactcattcccatgtggtatcaagagcctacccaccctgccctctctacccacc
atgccctcggacttccttgatccactggtgacgtccaagcccccctccaccaccaccacc
atccccacgggcactcacactgtgtccctgtcacacttcgaggtgtcggaccgggacaaa
ccgaggatctggtctctggcgcgtacagcggccacgggggtcatcctgggctctgctcac
cacggggccccagagctccggacagggagcatgctgggagactgccatctacaggggacc
aggctaccagtgactggtaccagacagtgtgggcccctcaggggcctccaggatcctact
aacatatccaatgctgagaaccctttccaggagggccccttgttgcaatctaaggtctat
agtgcaggcagctacaaccacaaggccctccaactgcactgttcctcctatcctgcgctt
tcagactcatgccaatactccactattgaaggattctccagtgggaaggcagagacagag
ccctcggaactcagtgacacatgtgtgaccctgcaggatgacaaggtcactgccttcaga
cctgttatgaagaggttgatggacacgcagtcattacacagtgggacttttatttag
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