Oncorhynchus tshawytscha (Chinook salmon): 112237016
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Entry
112237016 CDS
T05605
Name
(RefSeq) nectin-3 isoform X1
KO
K06592
poliovirus receptor-related protein 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04514
Cell adhesion molecules
otw04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112237016
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
112237016
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
otw04515
]
112237016
04090 CD molecules [BR:
otw04090
]
112237016
Cell adhesion molecules [BR:
otw04515
]
Immunoglobulin superfamily
Nectin family
112237016
CD molecules [BR:
otw04090
]
Proteins
112237016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
C2-set_2
I-set
V-set
ig
C2-set_3
C1-set
Motif
Other DBs
NCBI-GeneID:
112237016
NCBI-ProteinID:
XP_024261410
UniProt:
A0A8C8M8P5
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All DBs
Position
LG03:complement(62833188..62853312)
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AA seq
399 aa
AA seq
DB search
MSAISAEELLFIKAMRRASMLLKLSCVLLLIIQRDTESTRVIGECRTVVQGEDVDLSCRL
IETTEDLEQITWQKSTAEETQNHNFMLINPNGVTTFLASNGLSGRVQFIGNPSENLGSIR
ITAVRLLDEGTFKCIFSVFPSGTYTTEIPLTVLVPPVVSVTIDVPPVTGKNEVVLATCMA
AGAKPQADVTWKSGTFGSLLRTVTNFTQHTNGTTTVLSHLLGLPTRAANQQQVQCVVSQS
ALATERSYNYTIDIHYPPQTVNITFSEASKATVLRCVADGNPHPNYIWSRVAQPWPGSSV
RAEGDILHFLSLSSELNGLYVCEASNPYGRATGSLNVHISSETSAACWVLLVVILCLIVA
ALIWYRCKYGQFPWSPIIANQQFQAPLQVEEDEPGTSGF
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctatttcagcagaggaacttctattcatcaaagcaatgagaagagcaagcatg
ttactgaagctgagctgtgtgcttctgctcatcatccagagggatacagaaagtacacgg
gtcattggtgaatgcaggactgtggtacagggggaggatgtggacttatcctgcagactg
atagagacaactgaggacctcgaacagataacatggcagaaaagtactgcggaagaaaca
cagaaccataattttatgctgattaatcccaatggggttactacattccttgcatcgaat
ggattgagtggtagagtccagtttattgggaacccatcagaaaaccttggatctattaga
ataacagctgtcagactgttggatgaaggcaccttcaaatgtatcttcagtgttttcccc
agtggaacatacactacagagatacctctgactgtgctagttcctccagtagtgagtgtg
acaattgatgttcctcctgtcactgggaagaatgaggttgtcttggcaacctgtatggct
gctggtgccaagccacaggcagatgtgacgtggaagtcaggtacatttggcagtttgttg
aggacagtgactaacttcacacagcacaccaatggaaccaccacagtactcagccacctg
ctcgggttgccaaccagagcagccaatcagcagcaggtccagtgtgtggtcagccagtct
gccctggcaacagaaaggagctacaactacaccatagacatccactatccacctcagaca
gtgaacattacctttagtgaggcctctaaagccacagtcttacgatgtgtagcagatggc
aacccacaccccaactacatctggagcagagtggcccagccatggcctgggtcttcagtg
agagcagagggagacatactgcacttcctcagtctcagctctgagctgaatggtctctat
gtctgtgaggcctccaacccctacggacgagcaactggttccctcaatgtacacatatcc
tctgagacctctgctgcctgttgggttctactcgttgtcattctctgtctgattgttgct
gcactcatatggtaccggtgcaaatacggacagtttccttggagtccaatcatagccaat
caacagttccaggcaccactacaggttgaggaagatgaacctgggacgtctgggttctga
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