Oncorhynchus tshawytscha (Chinook salmon): 112237080
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Entry
112237080 CDS
T05605
Symbol
tars1
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
112237080 (tars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
otw01007
]
112237080 (tars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
otw03016
]
112237080 (tars1)
Enzymes [BR:
otw01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
112237080 (tars1)
Amino acid related enzymes [BR:
otw01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
112237080 (tars1)
Transfer RNA biogenesis [BR:
otw03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
112237080 (tars1)
Prokaryotic type
112237080 (tars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
112237080
NCBI-ProteinID:
XP_042176140
LinkDB
All DBs
Position
LG04:complement(838687..865087)
Genome browser
AA seq
719 aa
AA seq
DB search
MAEKSMAEQMEELKVDDGKKGGGAKDGKKKKVAAGDAGGKTELSPPPGYMEERLSLYTKL
KEEHDALMAERAEKDSKSIKVTLPDGKVVEAESWKTTPYQVAAGISQGLADATVIAKVNS
SVWDLDRPLEENCSLQLLKFDDDEAKAVYWHSSAHIMGEAMERVYGGCLCYGPPIENGFY
YDMFLDQEGVSSNDFPCLENLCKKIIKEKQPFERLEIKKETLLEMFKYNKFKCRILNEKV
TTPTTTVYRCGPLIDLCRGPHVRHTGKIKALKIHKNSSTYWEGKADMETLQRIYGISFPD
PKMLKEWERFQEEAKNRDHRKLGREQDLFFFHDLSPGSCFFLPKGSYIYNSLVDFIRSEY
RKRGFQEVVTPNIYNSKLWQTSGHWQHYSDNMFSFEVEKEVFALKPMNCPGHCLMFDHRP
RSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTMDQIEEEIKGCLDFLR
TVYDCFGFSFKLNLSTRPEKFLGEPAVWDQAEKQLENSLNEFGEKWVLNPGDGAFYGPKI
DIQIKDAIGRYHQCATIQLDFQLPIRFNLTFVSHDGDDKQRPVIIHRAILGSVERMIAIL
TENYGGKWPLWLSPRQVMVVPVGPTLDDYAQKIRDDFHRGGLMTDVDCDASCTLNKKIRN
AQLAQYNFILVVGEKEKTSETVNVRTRDNKVHGERSVNECMERLKQLKASRSRNAEEEF
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaaagagcatggcggagcaaatggaggagttgaaagttgacgacgggaaaaag
ggaggaggagccaaagatggaaagaagaagaaggttgcagcgggagacgctggtgggaag
acagagctgtcccctcctcccgggtacatggaggagcgtctgtccctgtacactaaactg
aaggaggagcatgatgctctgatggcagagagggcagagaaggacagtaaatccatcaag
gtgactctgccagatgggaaggtggtggaggctgagtcctggaagaccacaccctaccag
gtggctgctggcatcagtcagggtctagctgacgccaccgtgatagctaaggtgaacagc
tctgtgtgggacctggaccgacctctagaggagaactgcagtctgcagctactcaagttt
gatgacgacgaggctaaagctgtgtactggcactccagtgctcacataatgggtgaggca
atggagagggtctacggaggctgcttgtgttacggtccgcccatcgagaacggcttctac
tacgacatgttcctggaccaagagggggtgtccagtaatgacttcccctgcttggagaac
ttgtgtaagaagatcatcaaggagaagcagccgtttgagaggctggagatcaagaaggag
actctcctggagatgttcaagtacaacaaatttaagtgccggatcctgaatgagaaggtg
accaccccaaccactactgtgtacaggtgtggtccgctgattgacctgtgccgaggaccc
catgtccgacacactggaaagatcaaggccctgaagatccacaagaactcctctacctac
tgggagggcaaggctgacatggagactcttcagaggatctacggcatctccttccctgat
cctaagatgctaaaggagtgggaacgcttccaggaggaggccaagaacagggaccaccgc
aaactgggacgggaacaggatctgttcttcttccatgatctgtctccaggcagttgtttc
ttcctgcctaaaggatcctacatctacaatagtctggtggactttatcaggtctgagtac
cgtaagcgaggcttccaggaggtggtaacccctaacatctataacagtaagctgtggcag
acatcaggccactggcagcactacagcgacaacatgttctccttcgaagtggagaaggag
gtgtttgccctcaaacctatgaactgcccgggacattgtctgatgtttgaccaccgaccg
cggtcctggagggagctgcctctgcgaatggctgacttcggcgtgctgcatcgtaacgag
ctgtctggcgctctgactgggctgacccgtgtacgacgcttccagcaggacgatgcccac
atcttctgcaccatggaccagattgaggaggagattaagggttgtctggacttcctgcgt
acagtctacgactgttttggtttttccttcaaactcaacctgtccacccggcctgagaag
ttcctgggagagcctgcggtctgggatcaggctgagaagcaactggagaacagtctgaat
gagtttggcgagaagtgggtcctcaaccctggagacggggccttctatggaccgaagatt
gacatccagatcaaggatgctattggtcgataccatcagtgtgccaccatccagctggac
ttccagctaccaatccgcttcaacctcacctttgtcagccatgatggagacgataagcag
aggccagtcatcatccacagagccatcctgggatcagtagagaggatgatcgctatcctc
actgagaactacggagggaaatggccgctgtggctgtctcctcgtcaggtgatggtggta
cctgtaggacccacactggatgactatgctcagaagatccgtgatgatttccaccgtgga
ggtctgatgacagacgtagactgtgatgccagctgcaccctgaacaagaagatacgcaac
gcacagctggcacagtacaacttcattctggttgtgggagagaaggagaagaccagcgag
acggtgaacgtgcgtacgcgtgacaacaaggtgcacggagagcgcagcgtcaatgagtgt
atggagcgtctcaaacagctgaaggcctcacgcagccgcaacgcggaggaggaattctga
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