Oncorhynchus tshawytscha (Chinook salmon): 112237161
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Entry
112237161 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: WASP homolog-associated protein with actin, membranes and microtubules
KO
K20479
WASP homolog-associated protein with actin, membranes and microtubules
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112237161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112237161
Membrane trafficking [BR:
otw04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
112237161
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
112237161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JMY
WHAMM-JMY_N
WH2
Motif
Other DBs
NCBI-GeneID:
112237161
NCBI-ProteinID:
XP_042171355
LinkDB
All DBs
Position
Unknown
AA seq
786 aa
AA seq
DB search
MNSIDCERLDSLDGWVAIKTNIFEENETFKLGFIVQWNVIESKFAVTCHNRTLQRQKRKD
QLAVCETETSWAGLFSVNDLKNVHRQFTGVGDVVAPYFPDLSDFKEGNIWDMIFLSSNRT
FNQDDQERDLDTPCRQLEKYFSTAIDICGRKIVLDSLFPQDERDVEEYFENMQEFKRKTM
QDEVTRAKDHLRKILQSHGGADRMILLLQIYHEEDLAYQDLVTVATTFYQYLLQPFRDMR
ELAGLYKMEILKSLDEEELGPKRIAALEREAEEWRRRGEDAVSSIQDITVSYFIETSKAL
GGMLRVMGEDKRGFGQASWASAAPRLEKLRFLLAKETLQHMRATEMCLHRKKHTIREKMG
GLSGQDQRGPETVDNLELQYYEAQLELYDAKFEILKNEELLLVAQIDTLRRQIKELKEEV
VYYDVCEDPEELQSLSQTAAPLDPTHSPVNHLGRCLQQLETKRGNICARRAYLRNKKDQC
VEANEQKHRLAQHSSTHFTQHHGVALKREKRREDEERRKEWMDQERERTLSRLRSFREKR
QGSYVLKTPRSKMAAREPQCSDLSQPLSIISIGSSPSSNGAAPRKTPRKLKPKDIPVQIF
TPPLPPPSPLPTTLPTTAVPPPQTSSPPPPPPPLLPPTPPPPPPPLPALTPCKTEVGDSP
MPLSEKEAAPFPAKMTLKQNLGSMDEVLASLQRGQVRLRRVQPLAPPGPGLAPSGGDLRD
NIMSAIRLGVKLRKVVPAVPLPQDSRDTDLQKSIKAAMQRMKKVSSDSDEDEERGEDNTP
SAEWDS
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgaatagcatagactgcgagcgtttggacagcttggacggctgggtcgccatcaaaacg
aacatattcgaagaaaacgagacgttcaagctcggttttatcgttcagtggaatgtgatc
gagtccaagttcgcggtcacctgtcacaacagaactctccagcgacagaagcgcaaagac
cagcttgctgtctgcgaaaccgaaaccagctgggccggactcttctccgttaacgactta
aaaaatgtccaccgtcagtttacaggggtcggggatgtcgtcgcaccctatttccccgac
ctgtcggacttcaaagagggtaacatttgggacatgatctttctcagtagcaatcggacg
ttcaaccaagatgatcaagagagagatctggatacaccttgccgtcaactggagaagtac
ttcagcactgcgatagatatctgtggcaggaagatagtgctggactcgcttttcccgcag
gacgagcgagatgtcgaggagtactttgagaacatgcaggagttcaagaggaaaaccatg
caggatgaggtcaccagggctaaggatcaccttagaaagatccttcagagtcatggaggt
gcagacagaatgattctactgctacagatctaccacgaggaggacctagcctaccaggac
ctggtcaccgtagcaaccaccttctaccagtacctgctgcaacccttcagagacatgaga
gaactggcagggctctacaagatggagatactgaagtctctggatgaggaggagttgggt
cctaagaggatagcagcactggagagagaggcagaggagtggaggaggagaggagaggat
gcagtctcctccatacaggacatcacagtcagctacttcatagaaacatccaaagccctt
ggaggtatgctacgtgtgatgggggaggataagcgtggttttggtcaggcctcctgggcc
tcagcagctcctagactggagaagctgcgtttcctgctggctaaagagaccctgcaacac
atgagagcaactgagatgtgtctgcaccgcaagaaacacaccatcagagaaaagatggga
ggtctgtctggccaggaccagaggggaccagagactgtagataacctagagcttcagtac
tatgaggctcagctagaactctacgatgccaagtttgagatcctcaagaacgaagagctc
ctattggtcgctcagatcgacaccctgcgacgccagataaaagagctgaaagaggaggtg
gtgtattatgatgtgtgtgaggatccagaggagctccaaagcctatcacagacagctgca
cctttagaccccacccactcacctgtcaatcacctggggcgatgcctacagcagctggaa
accaagagagggaacatctgtgcccgccgcgcatacctccgcaacaagaaggatcagtgt
gtggaggctaacgagcagaagcaccgtctggcccagcacagctccactcactttacccag
caccacggagtagccctgaagagagagaagaggagagaggatgaagagaggaggaaggag
tggatggaccaggagagagagagaaccctgagcagactccgctccttcagagagaagcga
cagggaagttacgtcctgaagactccacgatccaagatggcagccagggagccgcagtgt
tccgacctctcccagcctctgtcaatcattagcatcggctcctccccttcatctaatggt
gccgcccccagaaagacccccaggaaactcaaaccgaaagacatccccgtccaaatcttc
actcctcctctccctcctccttcgcctctgccaactacacttcccactacagctgtaccc
ccacctcagacctcctctcctcctccccctccccctcccctcctcccccctaccccacct
cctccccctccacccctccctgccctcaccccctgtaaaacagaggtaggggactccccc
atgcctctcagtgagaaagaggccgcacccttccctgccaaaatgaccctgaagcagaac
ctaggttctatggacgaggtgttggcatcattacagcgtggtcaggtcaggctgcgtcgt
gtccagccccttgcccctcctggtcccggcctggcgccctccggtggcgacctcagggat
aacatcatgtctgccatcagacttggggtcaaactacgcaaggtggtcccagcagtgccc
ctgccccaggacagcagggacacggatctgcagaagagcatcaaggcagccatgcagagg
atgaagaaggtctcctccgactcagatgaagatgaggagagaggagaggacaacacgccc
tcggctgagtgggacagctga
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