Oncorhynchus tshawytscha (Chinook salmon): 112237167
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Entry
112237167 CDS
T05605
Name
(RefSeq) FHF complex subunit HOOK interacting protein 1A
KO
K26420
FHF complex subunit HOOK interacting protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112237167
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112237167
Membrane trafficking [BR:
otw04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
FTS/Hook/FHIP (FHF) complex
112237167
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
FTS and Hook-interacting proteins (FHIP)
112237167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAI16-like
DUF5917
KELAA
Motif
Other DBs
NCBI-GeneID:
112237167
NCBI-ProteinID:
XP_042185613
LinkDB
All DBs
Position
LG11:2169632..2207867
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AA seq
1028 aa
AA seq
DB search
MMMASMVANGNRDGRQGEALVLKGVDPETCMIVFKNHWAQVVKILEKHDPLRSNTSSNMA
ALGVIGLSSGGPMRFGGPIPGDEASAVQNYVEHILFLLMEEDAGQAGAMGPILEFVVMEN
VMERLFLWSLRRQFTDDMKLEQLKMYEMIVGQARQPLLHHKPVLRPLMMLLSSCSGTAGP
EVEAELVSLLNQLCCVLAKDQSVLELFFHTSEDQGAANFLIFSLLIPFIHREGLVGQQAR
DALLLIMSLSAENQRVAQHIAENTYFCPVLATGLSGLYSSLPTKLEVPGEEWHCLHREDW
LQMPTLVQFLNSLEFCNAVIQVAHPNIRDQLVSYIYNGFLVPVLAPALHKPTLEEVMTTT
AYLDLFVRSVSEPVLLQTFLSFILLHVHILDTLVHILDTLSRINTPFQLGTVSLALFQTL
IGLYCEDVMLQLILRYLIPCNHMMLSQRRVVKERDFYSVSAAKILALTPSCCSPEHSPPP
LRQLDSILWSKGTDNSPNTGTMETEETFLEEDGSCYSCVIGSEIYLDVNYLHYLYNARLG
ISSCTRACQVWSAPYDGEDPPPEEYQPSALEEAGARGRQAQTVNPKRSHPHPRPRPPCPP
QTTDPAPTNQLELEWDDSYDAGPVVSLEAATAESSRPPQLPAAEPPKHIQEMRRTAIMLV
KGSYIEESDFQDDVMVYDLVAKKDARDTVDRRRPSRETLPESEESEIDSEFNLEEDHFKE
SSLQEKDEVPLSNGLSLPLHPTNMEVNSSEVTKGSKEVKAHVADHNSNLQSPSAEVGDDL
MGQYEELIRTLGSDEAGTGGSSPVKTVDKEFRNPVVTPMEEDEVDFSSFSMDTPELEKPH
SSLFGTKLRSGSTRSHSVPFTGPFVSVLLSRLENMLDNSLHVNLLLTGILAQLAAYPQPL
LQSFLLNTNMVFQPSVRSLYQVLASLKNQIEQQASTKKDFPKLITSAQHCLLARESSLKG
QDTNSGDSRECSPLEAGRMMKSSPPPQPKTISLARTEVFATVLFTEFLKELAAIAQEHSI
LSHVPMEE
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggcctccatggttgccaacggaaacagggatggcagacagggggaggccctg
gtcctgaaaggggtggacccagagacctgcatgatcgtgtttaagaaccactgggcacag
gtggtaaagatcctagagaagcatgatcctctccgcagcaacaccagcagcaacatggct
gcccttggtgtcatcggcctctccagcggcggccccatgcgtttcggcgggcccatcccg
ggggatgaggccagcgcggtgcagaactacgtggaacatattctgttcctgctcatggag
gaggacgccggccaggcgggagccatgggacccatcctggagtttgtggtgatggagaac
gtcatggagaggctcttcctgtggagcctgaggcgacagtttactgatgatatgaaactg
gagcagctcaagatgtacgagatgattgtgggccaggcacggcagcccttactgcaccac
aaacctgtgttacgacccttaatgatgctcctgtcgtcgtgctcggggacagctggcccg
gaggtggaggctgagctggtgtcattactcaaccaactgtgctgtgtcctggccaaggac
cagtctgtcctggagctcttcttccataccagcgaggaccagggggcagccaacttcctg
atcttctccttgctgatccccttcatccaccgggagggcctggtgggccagcaggcccgg
gacgccctgctcctcatcatgtcactgtctgcagagaaccagcgcgtggcccagcacatc
gcagagaacacctacttttgtccggtgctggccacagggctgagcggtctctactcgtct
ctgcccaccaagctggaggtgcccggtgaggagtggcactgcctccacagagaggactgg
ctacagatgcccaccctggtccagttcctcaactcactggagttctgcaatgcagtcatt
caggtggctcaccccaacatcagggaccagctggtcagctacatctacaatggctttctg
gtgcctgtgttggcaccggccctccacaagccgaccctggaggaggtgatgactaccacg
gcctatctggacctgttcgtgcggtcggtgtcagagccggtcctgctgcagaccttcctc
tccttcatcctcctccacgtccacatcctggacacgctggtccacatcctggacacgctc
agccgcatcaacacacccttccagctgggtactgtgtctctggcgctgttccagactctc
attggactgtactgtgaggatgtgatgctgcagctcatcttgaggtacctgatcccctgt
aatcacatgatgctgagccagagacgtgtggtgaaggagagagacttctactctgtgtcg
gccgctaagatcctggcgctcacaccctcctgctgctcccccgaacacagccccccacct
ctcagacagctggactccatcctctggtcaaagggtacagacaacagtcctaacactggc
accatggagaccgaggagacctttttggaggaggatggctcgtgctactcctgcgtcatc
ggctctgaaatctacctggacgtcaactacctgcactacctttacaacgcccgcctgggc
atcagcagctgcacccgggcctgccaggtgtggtcagccccctacgatggagaggacccc
cctccagaggagtaccaacccagtgccctggaggaggctggggccaggggacgccaagcc
cagacggtcaaccccaagaggtcacatccacatccacggcctcgtcccccctgcccgccc
cagaccacagacccagcccctactaatcaactagagctggagtgggacgatagttatgat
gccggtccggtggtgtccctcgaggctgctactgctgagagtagtagacctccacagctg
cctgcagccgagccgcccaaacacatccaggagatgaggaggactgccatcatgctggtt
aagggttcctacatcgaggagtccgacttccaggatgatgtcatggtctacgaccttgtg
gcaaagaaggacgcccgcgatactgtggatcgccgcagacccagccgggagacactaccg
gaatcggaggaatctgaaatagactcagaatttaaccttgaggaggaccattttaaagaa
tccagtctacaggagaaggatgaggtccccctcagcaatggcctgagtcttccactccat
cccaccaacatggaggtcaacagctcggaggtcacaaaggggtcaaaggaggtcaaggct
catgttgcggaccacaactccaacctccagagcccctcggctgaggtgggggacgacctc
atgggtcagtacgaggagctgattcgtacgttgggcagcgacgaggccgggactgggggg
agcagccctgtgaaaacggtggacaaagagttccggaatcctgttgtcacccccatggag
gaggacgaggtggacttcagctccttctctatggatacgccagagctggagaagccgcac
tcatccctgtttgggaccaagctccgcagtgggagcactaggagccattcggtgcctttt
acagggccatttgtcagtgtgctgttgtcacgtctggagaacatgctggataactctctc
catgtcaacctcctgctgactggtatactggcccagctggctgcctacccccagccgctg
ctgcaatccttcctcctcaacaccaacatggtgttccagcccagcgtgcgctcactctat
caggtactagcatcccttaagaaccagatagagcagcaggcctcgaccaagaaggacttc
ccaaagctgatcacctccgcccagcactgcctcctggccagggagagttcactcaagggt
caagatacaaacagcggagacagccgagaatgttcccccctggaggcaggaaggatgatg
aagagctctcctcctccccagcccaagaccatttccctggccaggaccgaggtcttcgct
accgtcctcttcacagagttcctcaaagaactggcggccattgcgcaggagcactcaata
ctatcgcacgtccctatggaggagtaa
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integrated database retrieval system
