Oncorhynchus tshawytscha (Chinook salmon): 112237188
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Entry
112237188 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: ankyrin repeat and sterile alpha motif domain-containing protein 1B
KO
K21413
ankyrin repeat and SAM domain-containing protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112237188
Membrane trafficking [BR:
otw04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
112237188
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
SAM_1
Ank
Ank_5
Ank_4
Ank_3
SAM_2
Motif
Other DBs
NCBI-GeneID:
112237188
NCBI-ProteinID:
XP_042155921
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Position
LG17:23025397..23420344
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AA seq
1167 aa
AA seq
DB search
MGKEQELLEAARTGNVVLVEKLLSGKRGILGTASGSIPLPNLLSMWRGLNVNCADSSGYT
PLHHASLNGHRDVVLKLLQFEASTNVADSKGCFPLHLAAWRGDVDIVRILVHHGPSHCRV
NQQVTTHCSKLTDPTMRNILLQELTDPTMRNSRDETPLDLAALYGRLQVVCMLVTAHPNL
MSSHGTRRHTPLHLAARNGHHSAVHTLLEAGMDVNSQTENGSALHEAALYGKMDVVRLLL
DSGIDANITDCQGRTALEILREHPAQKSQQITALMQEYMMEEMMDNKSVLMEEPICQCPV
PTPRTSIPSPSAXPSLRHKNDAVTGELSKLLNEMKMCRDRDYSFEELCQTISSHSHSMES
FGSGHLSDEERRSNGTLSRVRKRPTPPLPPAQEEEEGEKSCGPAGFWEALTPCNGCHNLG
FSSVSQNSKRSAEIVPSPSLDVFLPEDEDNPYESVTTAVTRKPCSLDIGLFNACPLNGHS
PQVMVTEPELCNHRNSSSPTGPTPDCSPPSPDTALKSIDRVIRPQPKQRTSISSSLDVQN
QRPVNHSCDPSEVSSSLGYASFSTSPPASPPVSPNQDSLGSNDDCPPTDDGPYQQNPPPA
SSNTLLLPDDRRQSLVPVEFAGLLHGSSPACETPDTPYHLYTSNTNPKARKHTPPDPHTS
PVTTLGNHGNLTSVTQTPELGIGLPPPLIIPHTGNEAKALKTPKDPIKDDRPPKPQVVYR
TIFHTRVNQNPQSVLPSSSSPYGWNGEAVVVRGGVSGAGGPREGAPGSGYEDRAFTLGRM
RSIPRSVLDLKLSKSLSKSDSNLVAVSPIQEEYHWGSGARGQGPRGSPSPGDTTSPGGQL
ERTPSFTAEWEEIDKIMSSIGAGISTGTSSEGIKENNAGPRCPMQSVGQWLDSIGLVQYE
NHLLANGFDNVQFMGSNVVEDQDLLEIGILNSAHRQRLLQAIRLLPRVRPIGYDGNNPTS
VAEWLESLELGDYTKSFLINGYTSMELVKKIWEIELINVLKVSLIGHRKRILASLGDRLH
QDPPQKPPRAISLREPGGCNTPPQILPGQAAYTTAGVPGGSLDVQHLIMQADARRRQRSN
DNYLEEMPRSKLERQMAQVSMQGEWCEPITLRPPNEATSSTPVQYWQHHPEKLIFQSCDY
EAYYLGSMLVKELRGTESTQDACSKMR
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggaacaagaactactagaagcggcccggaccgggaatgtggtcctggtggag
aaattactgagtgggaaaaggggaatcctggggacagcctcgggctccatacctctgcca
aacctactgagcatgtggagaggcttgaatgtgaactgtgcagacagttcagggtacaca
cccctccaccacgcatcactgaacggacacagagacgtggtgttgaagttgctccagttt
gaagcctccaccaatgtggctgacagtaagggctgcttccccttgcacctggccgcctgg
cgtggagacgtagacatcgtccgtatcctcgtccaccacgggccctcacactgccgcgtc
aaccagcaggtgacaacacactgttctaagctgacagaccccaccatgaggaacatccta
ctgcaggagctgacagaccccaccatgaggaacagccgcgacgagacgcccctggacctg
gctgcactctacggacgacttcaggtggtctgtatgttggtgaccgcccaccccaacctg
atgagcagccacgggacaaggcgccacacgcccctgcacctggccgcccgcaacgggcac
cattcagccgtgcacaccctgctggaggccggcatggacgtcaactcccagacggagaat
ggcagtgctctccacgaggcagctctctatgggaagatggatgtggttcgtctgctgcta
gactcaggtattgatgccaacatcacagactgccagggaaggacagctctggagatcctc
agagaacaccccgcacagaagtcccagcaaatcactgcactcatgcaagaatatatgatg
gaggagatgatggacaataagagtgtgttgatggaggaacctatttgccagtgtcctgtc
cccacacctcgcacatctatcccctctccctccgccntcccctccctcaggcacaaaaat
gatgctgtgacaggggagctctccaagctgctaaatgagatgaagatgtgtcgggacaga
gactactcctttgaggagctctgccagaccatctcatcccactctcattccatggagagc
tttggcagcggtcacctatcagacgaggagcgacgcagtaacggcaccctgagcagagtc
agaaagcggcccactcccccacttcccccagcccaggaggaagaggagggggagaagagc
tgtggccctgctgggttctgggaggccctcacaccctgcaacggttgtcacaaccttggc
ttctccagcgtgtcacagaactcgaagcgctcggcagagatcgtaccatcgccctccctt
gacgtgttcttaccggaggatgaggacaatccgtatgagtccgtcaccaccgccgtgacc
cgcaagccctgctcgctggacatcggcctcttcaacgcctgccccctcaacggccactct
ccccaggtgatggtgactgagccggagctgtgtaaccataggaacagctcctcaccgacg
gggcctactccagactgctctcccccctccccagacactgccctgaagagcattgacaga
gtcatccgcccacagcccaaacagcggacctccatctcctcctccctggatgtccagaac
cagaggccagtcaaccacagctgtgatccctccgaggtgagctcgtccctgggctacgcc
agcttcagcaccagcccccctgccagcccgccagtcagccccaaccaggactcacttggc
tccaacgacgactgcccccccacagacgacgggccgtaccagcagaaccctccccccgcc
tcttccaatacactcctactaccagacgaccgacgacagagcctcgtccctgtagagttc
gccggcctcctccacggctcctcgccagcctgcgagacgcccgacacaccctaccacctc
tacacctccaacaccaaccccaaagcccgaaaacacacccccccagacccccacaccagc
ccggtaaccaccctcggtaaccatggcaacctcacttcggtaacccagacccctgaatta
ggaattggactgccaccgcccctcattatccctcacacaggaaacgaggcgaaggctctg
aagacccccaaagaccccatcaaagacgacagaccccccaaacctcaggtagtctatcgc
accatcttccacacccgggttaaccagaacccccagagcgtcttgccctcctcctcctcg
ccatatggttggaacggggaggcggtggtggtgagggggggtgtgtcgggagctggcgga
cctagggagggggcaccggggtctgggtacgaggacagggcctttaccctgggcaggatg
agatccatacctcgcagtgtgctggatctaaagctctccaagtcactgtccaagtctgac
tccaacctggtggctgtgtcacccatacaggaggagtaccactgggggtcgggggccagg
ggccaggggccgagaggaagccctagcccaggggacaccaccagtcctgggggccagcta
gagagaacaccctccttcactgctgaatgggaggagattgataagataatgagctccatt
ggggctggcatcagcactggcacgagctcagaagggatcaaggagaataatgcaggtccc
cggtgccccatgcagtctgtgggccaatggctggacagcattggactggtccaatacgag
aaccacctactggctaacggcttcgacaacgtgcagtttatgggcagtaacgtggtggag
gaccaggacctgctggagatcgggatcctcaactcagcccacagacagaggctgctacag
gccatacgccttctgcccagggtgcgtcctattggttatgacggtaacaaccccacgtca
gtggctgagtggctggagtctctggagctgggagactacactaagtccttcctcatcaac
ggatacacctccatggaactggtcaagaagatctgggagatagaactcatcaatgtgttg
aaggtcagtctgataggacacaggaagagaatcctggcctcgctgggagacaggcttcac
caagaccctccacagaaacccccacgggccatctccctacgggagcccggtggctgcaac
acccctccccagatccttccgggccaggctgcgtacaccacagcgggtgtcccagggggc
tcgttggacgtgcagcacctcatcatgcaggcggacgcacggcgccgccagcgctccaac
gacaactacttagaggagatgcctcgctccaaactggagcggcagatggcccaagtcagc
atgcaaggcgaatggtgcgagccaatcacgttgcgtcctcccaacgaggccacctcgtcc
actccagtgcaatactggcagcaccaccctgagaaactcatcttccagtcgtgtgactat
gaagcttactacctgggctccatgctggtgaaagagctgagaggaacagagtcaacacaa
gacgcctgctccaagatgaggtaa
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