Oncorhynchus tshawytscha (Chinook salmon): 112237196
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Entry
112237196 CDS
T05605
Name
(RefSeq) extracellular calcium-sensing receptor-like
KO
K04613
vomeronasal 2 receptor
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
otw04030
]
112237196
G protein-coupled receptors [BR:
otw04030
]
Others
Chemoreception
Vomeronasal pheromone
112237196
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_3
ANF_receptor
NCD3G
DUF2919
Ephrin_rec_like
Motif
Other DBs
NCBI-GeneID:
112237196
NCBI-ProteinID:
XP_042150942
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All DBs
Position
LG13:complement(85159630..85164016)
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AA seq
869 aa
AA seq
DB search
MSLCGWLWLLYCLHVPGSVWGLDGGGEGACRLIAKPVSGSVYRAGDVVIGGLFPIHVEAP
LPEQEFRSIKGNSTCTIFKQRAYRWLQTMIFAVEEINRDPALLPNLTLGFLAADTCRSDG
TTLGAALAMVSGKEASVVGTECGTTPEVPVIIGDAHSSASMVVAQTLGPFDLPMVSYFAT
CACLSDTWRYPSFFRTVPSDAFQARGMAKLLRQMGWVWVGLVSEDDDYGKFGVQLLLQEL
QGSGVCVAYSEVLPKLPSKRKIRHIADTIRGSTARVVVAFVGFTGHAEGLMEEVVRQNIT
DKQWIASEAWVTYSTIAAPTNLPSFAGTIGFALKKADIPGLGPFLTRLHPDGDYQKSDPF
LRDLWEEMFVCSLGIDLSVTLSSRRQCTGSEVIREGESQYADVSQLRGSYNVYKAVYAIA
YAIQDMMACRPGDGVFNGGQCPDIRKLQPSQIVHYLRGVNFSTPVGESFHFDMNGDPPAS
YDIINWHVTPEGTAEFVQVGHFLSSEGSDDQFHIDMDKVVWGGGSGDEVLVSVCSADCPP
GTRHAVQKGRPVCCFDCLSCAEGEISNTTGSVECIRCPERFWSNPDRTACIPQLVDFLSF
SDTMGVILSVISVSGATLTAGALATFLYHRHTALVKANNSELSFLLLLSLKLCFLCALVF
IGQPNPWTCMLRHTLFGISFVFCISCLLSRTVVVLVAFRATLPGENLMRYFSPTQQRMGI
SLCTLIQVLICVLWLALAPPRPAERRGREGRGPRVVLECEVGSVVGFSLVLGYIGLLASL
CLLLAFLARKLPDNFNEAKFITFSMLIFCAVWISFIPAYVSSPGKYTVAVEIFAILASSF
GLLFCLFAPKCYIILLRPERNNKKYMMSK
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgtgtggctggctgtggctgctctactgtctccatgtccctgggtctgtctgg
ggtctggatggcggtggagagggggcttgtcggctgatagctaagcccgtctcgggcagt
gtttatcgggcaggagatgtggtcattgggggcctgttccccatccatgtggaagcccct
ctgccagagcaggagttcagaagcattaagggaaattctacctgtacaattttcaaacag
cgtgcttaccgctggctccagactatgatctttgctgtggaggagattaatcgtgaccca
gccctcctgcctaacctcaccctggggttcctggctgctgacacatgccggtcagatggc
accaccctgggggcggccctagccatggtgagcggcaaggaggcctctgtggtgggcaca
gagtgtggcacaacccctgaggttcccgtcatcatcggggatgcccactcctcagcttcc
atggtcgtggcacagaccctcgggccgtttgatttacccatggtgagttactttgccacc
tgtgcgtgtttgagtgacacctggaggtacccctcattcttccgtacggtacccagcgat
gccttccaggctcggggcatggccaagctgctgcgtcagatgggctgggtgtgggtggga
ctggtgtcagaggatgatgactatggcaagtttggggttcagctgcttctccaagagctc
cagggatctggggtgtgtgtcgcttactctgaggtcctccccaagttaccgtcgaagaga
aagatcaggcacattgcagacaccatcagaggatctactgccagagtggtggtggcattt
gtaggattcacgggtcatgcagagggcctgatggaagaggttgtccgtcagaacattaca
gataagcagtggattgcctcagaggcctgggtcacctactcgactatcgccgccccgaca
aacctgccctcttttgccgggacaatcggttttgccctgaagaaagctgacattcccggc
ctggggcctttcctaacacgcctccatccagacggggactaccaaaagtccgacccattc
ctgagagatttgtgggaggagatgtttgtgtgttctctggggatagacctcagcgtgacg
ctgtcgtccaggcgacagtgtactgggtcagaggtcatacgtgagggggagagccagtat
gctgatgtgtctcaactgagaggcagctataatgtgtacaaggctgtgtacgccatcgcc
tacgccatacaggatatgatggcctgtcgaccaggggacggagtctttaatggtggacag
tgccctgatatcaggaagcttcagcccagccagattgttcattatctgaggggagtgaac
ttcagtactcctgtgggggaatctttccactttgacatgaatggtgatccgcctgcctct
tatgacatcatcaactggcatgtgacccccgaggggacggcagagtttgtccaggtcgga
cattttctgtcctctgagggatcggacgaccagtttcacatcgacatggataaagtggtg
tggggtgggggcagcggagatgaggtccttgtgtctgtatgcagtgctgactgtccccct
ggtaccaggcatgcggtacagaaggggaggcctgtgtgctgctttgactgtctgtcctgt
gctgagggagagatcagcaacacaacagggtcagttgagtgtattcggtgtccagagcgg
ttctggtccaaccctgatcgtacggcctgcatcccccagctggtggacttcctctccttc
agcgacaccatgggcgtcatcctgtctgtcatctcagtttccggggcaacactcacagcc
ggtgccctggccaccttcctctaccaccgtcacacggccctggtgaaagccaacaactct
gagctcagcttcctgctccttctgtcgctcaagctctgcttcctgtgtgctctggttttc
attggccagccgaacccgtggacgtgcatgctgagacacaccctgtttggtataagtttt
gtgttctgcatctcctgtctgctcagcaggacagtggtggtgctggtggccttcagggcc
actctgcctggagagaacctgatgagatacttcagccccacccagcagaggatgggtatc
tcactctgcacactcatccaggtgctgatctgtgtgctgtggctggccttagctccaccc
cgacctgctgagaggaggggcagagagggtcggggcccgagggtcgtcctggagtgtgaa
gtgggctctgtggtcggcttctctctggtgctgggctacatcggcctgctggcctccctc
tgtctccttttagccttcctggccaggaaactcccagacaacttcaacgaggccaagttc
atcaccttcagcatgctgatcttctgtgccgtgtggatctccttcatccctgcctacgtc
agctctcctgggaagtacacagtagctgtagagatctttgccatcctggcctccagcttt
gggctgctgttctgtctgtttgctccaaagtgttacatcatccttctgagaccagagaga
aacaacaagaaatatatgatgtccaaatag
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