Oncorhynchus tshawytscha (Chinook salmon): 112237204
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Entry
112237204 CDS
T05605
Symbol
neil1
Name
(RefSeq) endonuclease 8-like 1
KO
K10567
endonuclease VIII-like 1 [EC:3.2.2.-
4.2.99.18
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
112237204 (neil1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
otw03400
]
112237204 (neil1)
Enzymes [BR:
otw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
112237204 (neil1)
DNA repair and recombination proteins [BR:
otw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
112237204 (neil1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neil1-DNA_bind
Fapy_DNA_glyco
H2TH
Motif
Other DBs
NCBI-GeneID:
112237204
NCBI-ProteinID:
XP_042183105
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All DBs
Position
LG01:complement(1072830..1082884)
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AA seq
383 aa
AA seq
DB search
MPEGPELHLASLFVNRMCGAVVFTGPVQKSEVSKNPEVSFSCPAYTIIATSRGKEVRLTL
TPQKSDSAQGRCRRGKTGQVNQVQTMDIVFRFGMSGFFRFTTEAELPKHSHLRFYTNEKP
CRVLSFVDTRRFGSWQPNGTWQLNRGPCVMFEYLSYRENVLSHLSDRAFDRPICEVLLNQ
KYFNGIGNYLRAEILFRLNIPPFVKARTVLEGLQTHLSDEDRKSVVKVEVTDTEVKEEVT
NTEFKEEVTNREISDRAAVKEDESETPDLLRLCHTVPLEVIKLGGKGYDPEKMDYTDFKS
WLQCYCVEGMKSVRDHNGRTMWFKGDPGPMAPKDAKTKMIVKKEDDHDYKGGKKVKKARS
ESTMKPKYIKEKEVPQRRAGRRK
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagggtccagagttacacttggccagtctgtttgtcaacaggatgtgtggggca
gtggtcttcaccggcccagtacaaaaatcagaggtcagtaagaatcctgaggtctctttc
tcctgcccggcctacaccatcatcgccacctccagaggcaaggaggtccgactcactcta
accccccagaagagcgactctgcccaggggagatgcaggcgggggaagacaggtcaggtc
aaccaggtccagaccatggacatcgtcttccgtttcggaatgtctggattcttccgtttc
accacggaggcggagcttcctaaacattcccacctgcggttctacaccaatgagaagccc
tgtagggttctgagctttgtggacacacgccgctttggcagctggcaacccaacgggacc
tggcaactcaaccgagggccctgtgtcatgtttgagtacctgagctacagggagaatgtc
ctctcccacctgtccgacagagcgttcgaccggcccatctgtgaggttctgttgaaccag
aagtactttaacggcattggcaactacctgagagctgagatcctctttagattaaacatc
cctccctttgtgaaggctcggacggttctggaaggacttcaaacacatctgtctgacgag
gaccggaagtcagttgttaaagtggaggtcacagacacagaagtcaaagaggaggtcacc
aacaccgagttcaaagaggaggtcaccaacagagaaatctcagacagagctgctgtgaag
gaggatgagagtgagacaccagacctgctccgtctctgtcacacagtacctctggaggtc
atcaagttaggtggtaaaggttacgacccagagaaaatggactacactgactttaaatcg
tggctccagtgttactgtgtggaggggatgaagtctgtaagagatcacaacggcagaact
atgtggttcaagggagatccaggtcccatggctcctaaagatgccaaaacaaagatgata
gtgaagaaagaggatgaccatgattataaagggggaaaaaaggtaaagaaggcccgctct
gagagcacgatgaagccaaaatacatcaaggaaaaggaagtccctcagagacgggcagga
aggaggaagtaa
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