Oncorhynchus tshawytscha (Chinook salmon): 112237207
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Entry
112237207 CDS
T05605
Symbol
man2c1
Name
(RefSeq) alpha-mannosidase 2C1
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
112237207 (man2c1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112237207 (man2c1)
Enzymes [BR:
otw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
112237207 (man2c1)
Membrane trafficking [BR:
otw04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
112237207 (man2c1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Glyco_hydro38C2
Glyco_hydro_57
Motif
Other DBs
NCBI-GeneID:
112237207
NCBI-ProteinID:
XP_042183531
LinkDB
All DBs
Position
LG01:1022856..1066461
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AA seq
1029 aa
AA seq
DB search
MYHQPVLKNRRTLLERAEKFISEIYFTDCNLRGRLYGDACPLESISSSLSQQRIPFLEAV
KQNFEPYQVGDTFGPTWWTCWFKVSLRIPDSWRGKQVHLSWESDGEAMVWRDEQPVQGLT
KEGEKTSYILTECLKDDEPHSISLYVELACNSLFGAGQGSMIAAPDPDRKYSVQKAELVV
FKSDVRELLTDLEMLVDMVKLLGEGEQRGYQALFTANEMVNLCEPTNPSSFPAARSLAQK
FFSQRNGESQHTVHAMGHCHIDSAWLWPYEETIRKCARSWVTVIRLMEKNPHMVFTCSQA
QQFDWVKSWYPGLFSQIQHFVKKGQFIPVGGTWVEMDGNLPSGESMVRQFLEGQRFFKKE
FGNYCKEFWLPDTFGYSAQLPQLMQSSGITRFLTQKLSWNLVNTFPHNTFFWEGLDGSQV
LTHFPPGNSYEMKGKVEDLVNTVKNNKDKGRANHSAALFGFGDGGGGPTQLMLDRLDRVQ
DTDGLPRVQMSSPNRLFSELEADSSLLCTWTGELFLELHNGTYTTQAQIKLGNRQCETLL
HDVEVASSLALCLDKTFQYPSEPLQILWRQLLLNQFHDVIPGTYSLRYYQDIRTVGTRLL
RVSCRALGSEGTMTKTGDSDSTATSVAVLNTLPWERTEVLPLTGGAPDHHQPCLALVTVP
SVGVVSVRDATATKPVPLVSVKVQADGTVLMENGILRAVVNKDGCLASLYLVETNREAIS
HGCSGNQFVLFDDVPLYWDAWDVMDYHLQTRKPVVEVVSPVQIASPGGLRGSVTFTLRIS
DKSTITQEIILDAMCPYIKFNTQVEWFESHKFLKVEFPVRVRSPNATYEIQFGHLQRPTH
RNTSWDWARFEVPITSFIQFVGHKWADLSEHDCSFIFLLKRLRAPKSPDANADMGSHQFT
YAVMPHTGTFQEASVIQWAYNLNNPLRLIDHAPGSHIVAWSAFSVSAAAVILETVKQAED
RKDGLVVRLYESHGSSVSVYLTAGFPITEAWHCDLLERVDPSRPAPITASGISISFSPFQ
IVSLLLYLK
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgtatcatcaaccggtactgaagaaccgacggactcttctggaacgagctgagaaattc
atatctgagatttatttcaccgactgcaaccttaggggaagactatatggagacgcctgt
cccctggagtccatctcctcgtctctgtcacagcaacggatccctttcctagaggctgtc
aaacagaactttgagccgtatcaagttggtgatacctttggacctacatggtggacatgc
tggtttaaagtatctctgaggataccagactcctggagagggaagcaggtccatctgagc
tgggagagtgatggagaggccatggtctggagggatgagcaacctgtacaggggttgacc
aaagaaggggagaagaccagctacatcttgactgagtgtctgaaggatgatgagccacac
agcatctccctgtatgttgagctggcgtgtaacagtcttttcggagcgggacagggatcc
atgattgcagcacctgacccagacaggaagtactctgtccagaaggctgagcttgtggtg
tttaagtcggacgtcagggagctgctgactgatttggagatgctggtagacatggtcaag
ttgctgggtgagggggaacagcgtgggtaccaggctctgttcacagccaatgagatggtg
aacctgtgtgagccgaccaatcccagctcatttcctgcggcccggagtctggctcagaag
ttcttcagccagaggaatggagagagccagcacactgtccacgctatgggacactgccac
attgactcagcctggctgtggccctatgaggagaccatcaggaagtgtgccaggagctgg
gtgactgtgatcagactgatggagaagaaccctcacatggtcttcacctgttcacaggct
cagcagtttgactgggtgaagagctggtatccaggcctgttctctcagatccaacacttc
gttaagaagggacagttcatcccggtaggaggcacctgggtggagatggatggaaacctg
ccgtcaggtgagtccatggtcagacagttcctggagggacagcgattcttcaagaaggag
tttggaaactactgcaaagagttctggttgcctgatacgtttggctactcagcccagctc
ccccagttgatgcagagttcaggcatcacacgattcctgacgcagaaactcagctggaac
ctcgttaacaccttccctcacaacacgttcttctgggagggtctggatggttctcaggtt
ctgacacactttcccccagggaactcctatgagatgaaggggaaggtggaggatctggtc
aacactgtgaagaacaacaaggacaaaggacgagccaatcacagcgcagcactgtttggt
tttggagacggaggaggagggcccacccagctgatgttggacaggttggacagggtccag
gacacagacggactgcctcgggtccagatgtccagtcctaaccggctcttctctgagctc
gaggcggactcctctcttctgtgcacctggactggagaactgtttctagaactacacaac
ggcacctacaccacacaggcacagattaagctagggaatcgtcagtgcgagaccttgctc
catgacgttgaggtggccagcagcttggctctgtgtctggacaaaacgttccagtacccc
tccgaaccgctacaaatcctctggaggcagctcctcctgaaccagttccatgatgtgatt
cctggcacctactcactacgatattatcaagacatccgtaccgtggggaccagactgctg
cgtgtttcctgtcgggccctggggtctgaagggactatgaccaagacaggagactctgac
agtactgctacttccgttgctgtcctcaacaccctgccctgggaacgcaccgaggttctc
ccgctgacagggggcgctcctgaccatcatcaaccatgcctagctctggtgacagtcccc
agtgttggtgtagtttctgtccgtgatgccactgctaccaaacctgtccctctggtctcc
gtcaaggttcaggctgatggtactgtcctcatggagaatgggatattacgtgctgttgtt
aataaggatggatgcctggcttccttgtacctggtcgagactaacagagaggcgatatct
cacggttgcagtgggaaccagtttgtgctgtttgatgatgttcctctgtactgggacgcc
tgggacgtgatggactaccacctacagacacggaagcctgtagtagaggtggtgtctcct
gtccagatagcatctccaggaggactgagaggcagtgtgaccttcactctcagaatcagt
gataagagcaccatcacccaggagatcatcctggatgccatgtgtccttatatcaagttc
aacactcaggtggagtggttcgagtcccataagttcctgaaggtagagttcccagtgagg
gtgaggagccccaacgccacctatgagatccagtttggacacctgcagagacccacacac
aggaacacgagctgggactgggcacgcttcgaggtaccaataacatcttttatacagttt
gtgggccacaaatgggcagacctatcagagcacgactgttcttttatttttcttcttaaa
agactgcgagctcctaagtctcctgatgccaacgctgacatgggcagtcatcagttcacc
tacgctgtcatgccacacacaggaaccttccaggaagcgtcagtcatccagtgggcctac
aacctcaacaaccctctgaggctgatcgaccacgcccccggctcccatattgtagcctgg
agcgccttctctgtcagcgctgcagccgtcatcctggagaccgtcaagcaggcggaggac
aggaaggatggtctggtagtacggctctatgagtcacatggcagtagtgtcagtgtgtac
ctcacggcaggcttccccatcacagaggcttggcactgtgatctactggagcgagtggat
ccctctcgccctgcaccaatcacagcctccggaatctctatcagcttcagtcctttccag
attgtgtcccttctactgtacctgaagtaa
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integrated database retrieval system
