Oncorhynchus tshawytscha (Chinook salmon): 112237209
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Entry
112237209 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: IQ motif and SEC7 domain-containing protein 1-like
KO
K12495
IQ motif and SEC7 domain-containing protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112237209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112237209
Membrane trafficking [BR:
otw04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
112237209
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
IQ_SEC7_PH
Sec7
Motif
Other DBs
NCBI-GeneID:
112237209
NCBI-ProteinID:
XP_042179674
LinkDB
All DBs
Position
LG07:76855438..76985132
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AA seq
1169 aa
AA seq
DB search
MTLQHGNRDRSSSSSGHSASAVHREERREERGAQQTMKERCGSVEVWKCGSVEGGEACDL
TDLSLYSLQCGSVEGEEACAYEVGGSLDQYSRGIPLTHSVDGTGQDRFDGGHLFSHVVLP
GQPRSRRPKLQHNQSILRKQAEEEAIKCSRSLSEGYELSADLQDKKVEVLEHRYGGRFIT
RHAARTIQTAFRQYQMNKNFKRLRSSMSENRMSRRIVLSSMRMQFSLEDPENVHQSSFLT
DNGTKHLGALVQSECSSDLGGVVPGTMKSPVVAQNDDFTDAITELEDAFSRQVKSLAESI
DDALNSRSLHREERGPGETRQGGRGHPDLDKDRDRELFSYQVKPSSHSSAEHHKLDEMTA
SYSDVTLYIDEEELSPPLPLSQSLDHTYSPLPLSQSLERPYIPLPSVDRPSSKESELRLR
SLSWSLVHKDDKGQGSDTSCRSTPSPKQQEQRLRVDRLPLLTIEPPSDSSVELSDRSDRS
ILKRQKAYDRQPISQPASPKHPPPHPSSLSHPRGLPPKGTSWDEDAPRYRPRALEAHLAI
NGMANRQSKSESDFSDGDNDSINSTSNSNDTINCSSESSSREQTLRKQTYHKETRSSWDS
PAFSNDIIRKRHYRIGLNLFNKKPEKGCQYLTDRGFVPDTPEGVAHFLLQRKGLSRQMIG
EFLGNRQKQFNRDVLDCVVDEMDFSALELDEALRKFQAHIRVQGEAQKVERLIEAYSQRY
CICNPGVVRQFRNPDTIFILAFAIILLNTDMYSPNVKPERKMKLEDFVKNLRGVDDGGDI
PQEMLTGIYERIRKRELKTNEDHVSQVQKVEKLIVGKKPIGSLHHGLACVLALPHRRLVC
YCRLFEVPDPNKPQKLGLHQREIFLFNDLVVVTKIFQKKKNCVTYSFRQSFSLHGMQVLL
FENQYYPNGVRLTSAVPRADVKLLINFNAPNPQDRKKFTDDLRESIAEVQEMEKYRIESE
LEKQKGVVLPSLSQSSGLKKDSGNGQMGRGSLDDNYAMGEGLKRSALSSSLRDLSDAGKR
ERRSSAGSLDSNTEGSIISHPSPHMRRRATSSRDRDGPSRGHSVPTTSSSLLGSLFGTKR
AKSPSLSPQHPTNLHQTAQSQADTQNQLLQGAQYCQNPPPYHHHHHYHPLPLGLPPPPLS
TSPPHHHPLPPTPTASSTKPKHSGISTVV
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgaccttgcagcatggcaacagagaccgtagcagctccagcagtggacactcagcctca
gcagtacacagagaggagaggagggaggagagaggagctcagcagaccatgaaggagagg
tgtggaagtgtggaagtgtggaagtgtggaagtgtggaaggtggggaggcttgtgatcta
acagatctctctctctactccctgcagtgtggaagtgtggaaggtgaggaggcttgcgcc
tacgaggtgggcgggtctttagaccaatacagtcgaggcatccctctaacccacagtgta
gacggtaccgggcaggaccgcttcgacggtggacatctcttcagccacgtggtgttacca
gggcaaccacggtcacgacgacccaagctgcagcacaaccagtccatcctcaggaagcag
gccgaggaggaggcaatcaaatgctcccgatccctgtctgagggctatgagctgtcagcc
gacctacaggacaaaaaggtggaggtgctggagcataggtatggaggccgtttcataacg
cgtcatgcggcccgcaccatccagacagccttccgccagtatcagatgaacaagaacttt
aaacgtctccgcagttccatgtccgagaaccgcatgtcccgacgtatcgtcctgtccagc
atgaggatgcagttctccttggaagaccctgagaatgttcatcagtcgtccttcctcacc
gacaacggaaccaaacacctgggggccctggtccaatcagaatgcagctctgacctgggg
ggtgtggtcccaggtactatgaagtcacctgtggtggcccagaacgatgacttcactgac
gctataacggagctggaggacgcgttctcccgtcaggtcaagtctctggccgagtcgata
gacgatgctctgaatagtaggagtctgcacagggaggagagggggccaggagagacgagg
caaggggggagaggacaccctgacctggacaaagaccgagacagagagctgttctcctac
caggtcaaaccctcctcacacagcagtgcggaacaccacaaactggatgaaatgacagca
tcatacagcgatgtgactctctacatcgatgaggaagagctgtcccctcctctccctctg
tctcagtccctggaccatacctactctcctctccctctgtctcagtccctagagcgcccc
tacatccccctaccatcggtagaccggccctcctccaaagagtcggagctgcgtttgcgt
tctctctcctggtctctggtccataaggatgataaaggtcaggggtcagacacctcctgc
cgcagcacaccctccccgaagcagcaggagcagaggcttagggtcgaccgcctcccgctg
ctgaccatcgagccgcccagcgacagctctgtggagctcagtgaccgttccgaccgctcc
attctgaagagacagaaagcctacgatcgccagcccattagtcagccagccagccccaaa
catccccctcctcacccctcctccttgtctcacccccgtggcctgccccccaagggaacc
tcctgggatgaggatgctccccgctaccggccacgcgcactagaggcccacctggcaatc
aacgggatggctaaccggcagagcaagtcagagtcggacttctcagatggggacaatgac
agtatcaactctacatctaacagtaatgacactattaactgcagctctgagtcctccagt
agagaacagaccctcagaaaacagacctatcacaaagagacacgcagcagctgggactca
ccggccttcagtaatgatatcatcaggaagagacactatcgtatcggactaaacctgttt
aacaagaagccagagaagggttgtcagtacctgacggatcgagggtttgtcccagacact
ccagagggagtggctcacttcctgctccagaggaagggtctgagcaggcagatgattgga
gagttcttggggaacaggcagaaacaattcaatagagacgtcctggattgtgtggtggat
gagatggatttctcggccttggaactagatgaggctctcaggaagttccaagctcacatc
agagtccagggagaggcccaaaaggtggaaagactcatagaagcatacagtcagaggtac
tgtatctgtaaccccggggtggtacgacagttccgtaaccccgacaccatcttcatcctg
gcgttcgccatcatcctcctcaacactgacatgtactctcccaacgtcaagccagagagg
aagatgaagctggaggactttgtcaagaacctcagaggtgtggatgatggaggggacatc
ccacaggagatgctgacaggtatatatgagaggatcaggaagagggaactgaagaccaac
gaagatcacgtctctcaggtccagaaggtcgagaaactcattgttgggaagaaaccgatt
ggttctctgcaccatggtctagcctgtgttctggccctgccacaccgcaggctggtgtgt
tactgcaggttgtttgaggttccagaccccaacaagcctcagaaactgggtctgcaccag
agagagattttcctcttcaatgacctggtggtggtgacaaagatcttccagaaaaagaag
aactgtgtgacatacagcttcagacagtccttctcccttcatgggatgcaggtgctgctg
tttgagaaccagtactatcctaacggtgtgcggttaacttcggcggttccccgagcggat
gtcaagcttttaatcaacttcaacgctcccaaccctcaggacaggaagaagttcactgac
gacctgagagaatccattgccgaggtccaggagatggagaaataccgcatagagtcggag
ctagagaagcagaagggcgtggtccttcccagtctatcacagagctcggggctgaagaag
gactctgggaacggccaaatgggtcgagggagccttgatgacaactacgccatgggggag
gggctaaagaggagtgccctcagcagctcgctacgagacctctcagatgcaggtaagcgt
gagcgccgcagcagtgcaggatcactagacagcaatactgaaggctccatcattagccac
cccagtccccacatgagacgcagagccacgtcttcccgagacagagacggtccttccaga
ggacattctgtccccaccacctcctcttccctcctgggctctttgttcgggaccaagagg
gccaagtccccctccctgtctccccagcaccccaccaacctgcaccagacggcccagagc
caggcagatacacagaaccagttgcttcaaggagcccagtactgccagaaccctccaccc
taccaccaccaccaccactaccaccccctgcccctgggtctgccccctcctcctctctcc
acctcccctcctcaccaccacccactgcctcccacacccactgcctcctccaccaagccc
aaacacagcggcatcagcaccgtggtttga
DBGET
integrated database retrieval system
