Oncorhynchus tshawytscha (Chinook salmon): 112237236
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Entry
112237236 CDS
T05605
Name
(RefSeq) transcription factor E3 isoform X1
KO
K09105
transcription factor E3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04137
Mitophagy - animal
otw04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
112237236
04137 Mitophagy - animal
112237236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112237236
Transcription factors [BR:
otw03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
112237236
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Motif
Pfam:
MITF_TFEB_C_3_N
DUF3371
HLH
bHLH_IRO3
Motif
Other DBs
NCBI-GeneID:
112237236
NCBI-ProteinID:
XP_042160250
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Position
LG22:complement(43364269..43407268)
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AA seq
465 aa
AA seq
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MTSRVLMRQELMRQQARDQERREAQHQVSSAQLRTTDSTPAISMAPGHTGARPPPAQVPV
EVLKVQTHLENPTWYHIQASQRQQVKHYLSSTLGNKLTNQTLGASPSPQSGSAPSLQPAA
SSSPSSPLAVLSLSSNKEEMEDVIDDIISLESSLNDEFFTLIDPGLQVANTMPVSVNMLD
VFSSGGMAAPNITVSNSCPADLHTVKTELTGTEVEAKAMMKERQKKDNHNQIERRRRFNI
NDRIKELGALIPKSSDPPPCYGDRETRWNKGTILKASVDYIRRLQKEQQRAKEVETRQRK
LEHSNRNLLLRIQELEMQARLHGLSTPASSSQGSSSSHLSLSQSLDPSTGDVLSRTLLSL
SGGQGLQAASPSFLSPPPSASPVGLMTMGSPLDLDSLSFSDLDDPSAAAFHASLLPDMGL
GDILMDDRGLGMSSVGGRDPLLSSVSPGVSKTSSRRSSFSMEEDL
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcccgggtgttgatgaggcaggagctgatgcgccagcaggccagggaccaggag
aggagagaggcccagcaccaggtctcctcggcccagctacgcaccaccgactccacccca
gccatctccatggccccggggcataccggggccagacctccccctgctcaggtccctgtg
gaggtccttaaggttcagacacacctggagaacccaacatggtatcacatccaggcctcc
cagagacagcaggttaaacactacctctcctccaccctggggaacaaactgaccaatcag
acgctgggcgcctccccctcgcctcagtccggctccgccccctctctccagcctgcagcc
agtagctctcccagcagcccattggctgtgctcagcctgagctccaacaaagaggagatg
gaagacgtgatcgatgacatcatcagtcttgaatccagtctcaacgatgagttctttacg
ttgatcgaccctggcctacaggtggccaacacgatgccggtgtccgtgaacatgctggat
gtgttcagcagtggagggatggctgctcctaacatcaccgtgtccaactcctgtcctgct
gacctgcacaccgtcaagactgagttaaccggtacagaggtggaggctaaagctatgatg
aaggaacgacagaaaaaggacaatcataaccagattgagagacggaggaggttcaacatc
aacgatcgcatcaaggaactgggagctctcatccccaaatcgagtgacccacccccctgc
tacggagacagggagacgcgttggaacaagggcaccatcctgaaggcgtctgtggactac
attaggaggctgcagaaggagcagcagagagccaaggaggtggagaccagacagaggaaa
ctggagcacagcaaccgtaacctactgctacgtatacaggagcttgagatgcaggcccgc
ctccacggcctctccaccccagcctcttcctcccaaggcagctcctcctcacacctaagc
ctatcacagtccctggaccccagcacgggcgacgtcctctccaggaccctcctctccctg
agtggtggccaaggcctccaggccgcctccccctccttcctgtctccacccccctcggcc
tctccggttggtctgatgacaatgggcagccccttggatctggactctctgagcttctct
gacctggatgacccgtcggccgcagccttccatgcctccctgctgccggacatgggtctg
ggggacatcctgatggacgacaggggactggggatgtcctcggttgggggcagagacccc
ctgctctcctccgtctccccgggagtctccaagacctctagtcgcaggagtagcttcagc
atggaggaagatttgtga
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