Oncorhynchus tshawytscha (Chinook salmon): 112237238
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Entry
112237238 CDS
T05605
Name
(RefSeq) transcription factor Sox-21-B
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112237238
Transcription factors [BR:
otw03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
112237238
BRITE hierarchy
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
112237238
NCBI-ProteinID:
XP_024261605
UniProt:
A0AAZ3RYX3
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Position
LG03:45798313..45800705
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AA seq
243 aa
AA seq
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MSKPMDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDE
AKRLRAMHMKEHPDYKYRPRRKPKTLMKKDKFAFPVPYNLGEHDALKVSGLSHGALHESL
LGNPDKAAAAAAAAAARVFFNPSMTTNPYSFFDLGSKMSELSSPSFPYPSLGYPGGTAFS
GTGSVGGTHTHTHSHPAPGNPGYMIPCNCTGWPSAGLQPPLAYILLPGMGKPQLDYPAYA
AAL
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaccaatggatcacgtaaaacgcccgatgaatgccttcatggtttggtccaga
gcgcagagaagaaaaatggctcaggagaacccaaaaatgcacaactccgagatcagcaaa
agattgggagcggagtggaaacttctcaccgagtcagagaaaaggccattcattgacgaa
gctaaacgactgagagccatgcacatgaaggaacaccctgactataaatacagacctagg
cggaagccaaagactctgatgaaaaaagacaagtttgccttcccagtgccctacaatctt
ggagagcacgacgcgcttaaagttagcggtctatctcatggagcacttcacgagtcccta
ttagggaacccagacaaggcagcagcggcagccgcggccgcagcagcgagagtcttcttc
aacccgtccatgaccacgaacccctattcattttttgacctcgggtcgaagatgtcagag
ctttcctctccatcgtttccttacccatctctgggctaccctggtggcacggctttctct
ggaactggtagtgttggtggaacacacactcacactcactctcatccagccccgggcaac
ccaggctacatgatcccctgtaactgtacgggctggccctctgcgggtcttcagccaccg
ctagcctacatcctgctgcctggcatgggcaaacctcaacttgactaccctgcatatgca
gcggcattatga
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