Oncorhynchus tshawytscha (Chinook salmon): 112237254
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Entry
112237254 CDS
T05605
Name
(RefSeq) denticleless protein homolog
KO
K11790
denticleless
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112237254
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
112237254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_DCAF12
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_DCAF4
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
WDR54
TAF1C_beta-prop
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
112237254
NCBI-ProteinID:
XP_024261621
LinkDB
All DBs
Position
LG18:8817746..8825380
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AA seq
671 aa
AA seq
DB search
MLFRSIVDRGVRKLRRNDLSPKYPLSSLLNGYQCARHDEHISYGNMGVAVPPFGCAFSTA
RGLQSVFAVANEEGVLRLYNTDNRQSPVLKEWMAHENAVFDLAWVPGEASLVTASGDQMA
KLWDVASGELLGSFKGHQCSLKSVAFTQQEKAVFCTGGRDGNIMVWDTRCSKKDGFYRQV
KQISGAHNKMDRNTPSNTKKRRPGTRGMAPSVDSQQSVTVVLFRDAHTLISSGAVDGIIK
MWDLRKSYTAYHHDPIPLQVYPYPGSSTRKLGYSGLVLDSTGSNLFSNCIDDNIYMFNVS
GLKTTPVAVFAGHLNSSFYVKSTVSPDDQFLASGSSDYHTYIWKISDPKQAPMMLQGHNQ
EVTSIAWCPTDFTKIASCSDDNTVRIWRLDRGTDGAKSSVGEANLVGWACPKPATTGSIP
RPLNHMESTPAKSPQAGSLWALSSPQPAACSRSRADVPLPSSTTTASTLQGAKATLLCQK
TPSSIRNWFSRTPGSPWGQVTSPLHTVLSPQSPTGTPPSERRAKRRLETGDCGAAGGCDD
AGECNCITELYPAAKSSRGLAGMCCPSQEQPQVGTERSEAWEGADLQVEDPSTQADKENQ
SPGGADWLSVMSQRLRKGVGNTSSIPRSPIACTRRDGRMPTSPAMHSPSQAMRSLRSMQK
ISSYFQQKTLE
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgctttttcgctccattgttgacagaggagtccgtaaattaaggcgcaatgacctcagc
ccaaagtacccgttgtcctctctgctgaacggctaccagtgtgcacggcatgatgaacac
atctcatacgggaacatgggggtagccgtgcccccttttggatgcgccttctctacagct
cgagggttgcagagtgtatttgctgtggccaacgaggagggtgtcttgaggctctacaac
acagataacagacagagtccagtcctgaaagaatggatggcacacgagaatgctgtcttt
gaccttgcttgggtgccaggggaggctagcttggtgactgcatcaggtgatcagatggcc
aagctgtgggacgtggcatcgggggaactccttggcagcttcaaggggcaccagtgcagc
ctcaagtctgttgcattcacacagcaggagaaagctgtgttctgtactgggggccgagat
gggaatattatggtctgggacaccaggtgcagcaaaaaagatggattctacaggcaggtg
aagcagatcagcggggctcacaataagatggatagaaacacaccctctaacacgaagaag
agacgcccaggcacacgtggcatggccccctctgtggactcacagcagagtgtcactgtg
gtgctgttccgtgatgcacacaccctcatctcttcaggagctgttgatgggataatcaag
atgtgggaccttcggaaaagctacactgcataccaccacgaccccataccgctccaggtg
tacccgtacccaggctccagcacacgaaagctaggttactcagggctggtgttggactcc
accggctccaacctgttctccaactgcatcgacgacaacatctacatgtttaacgtcagt
ggattgaaaaccactccagtggcagtcttcgctggtcacctcaactcctcgttttacgtc
aagtccactgttagcccagacgaccagttcctggctagtggctcaagtgactatcataca
tacatctggaagatctccgacccaaagcaggctcctatgatgcttcagggccataaccag
gaagtgacctccatcgcgtggtgcccaacagatttcacaaagattgcttcctgctctgat
gacaacaccgtacggatctggcgtctggaccgggggacggatggagcaaagtcctctgtc
ggagaggccaatctggtgggctgggcatgtcctaaacctgccaccaccgggtccattcca
aggcctttgaaccacatggagtccaccccagccaagagtccccaggcagggagtctgtgg
gccctgtcctccccccagcctgccgcctgctccaggagtagagccgacgtgcctctaccc
tccagcaccactaccgcctccacccttcagggtgctaaagccaccctcctatgccagaaa
acaccctcctccatcaggaactggttttcccgaacccccgggtctccttggggacaggtc
acctctcctctccacacggtgctcagcccccagagcccaaccggtactcctccctcggag
aggagggccaagcggcgactggagacgggtgactgtggggcagcagggggctgcgatgat
gcaggggagtgcaactgcattacggagctctaccccgcagccaagagcagccgaggactg
gcaggcatgtgctgccccagccaggagcaacctcaggtgggcacagagaggagtgaggcc
tgggaaggagcagacctccaggtggaggacccatccacacaggcagacaaggagaaccaa
tctccaggtggggcagactggttgtcagtgatgagccagaggctgaggaagggtgtggga
aacaccagcagcattcccagaagccccattgcctgcacgaggcgagatggcaggatgccc
acctcaccggcaatgcactctccctcccaagcaatgcgctcactacgatccatgcagaaa
atatcctcctacttccagcaaaagactttggagtaa
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