Oncorhynchus tshawytscha (Chinook salmon): 112237306
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Entry
112237306 CDS
T05605
Name
(RefSeq) nucleolar and coiled-body phosphoprotein 1
KO
K25818
nucleolar and coiled-body phosphoprotein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
otw03021
]
112237306
Transcription machinery [BR:
otw03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Others
112237306
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SRP40_C
Motif
Other DBs
NCBI-GeneID:
112237306
NCBI-ProteinID:
XP_042161780
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Position
LG25:complement(44678650..44705570)
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AA seq
992 aa
AA seq
DB search
MAEQNSVPSDLYKHVYSFLLENKFTKAAQHFIKQAKVPPQNEKQDAGLLDIFNFWVKSPE
AKKRKALPNGPGTSDRPSAKKAKTAESSSEESSSEEEEEEAAAPAKATPTATAAESSSSD
DSSDEEAAAKKPAAAKASVKTPVAAAAKASVKTPVVAAAKASVKTPVVAAAKASVKTPVA
AAAKASVKTPVVAAVRKKDSSSSSESSEDEAPAKSPVASEYIEPKGKAAAATPKAAATPK
AGTTAKAVAQKKAETSSSEDSSSEDEAPAKTPPAKTPAKAAESSSDDSSSDEEETPPSKK
AKPGEYSAVPPPGAAVKKALAPAVARKAKKDRSSDTREEEVSAVPVKSTPAKTVTPKPAA
AAKGESSSESSDSSSEEEEAKKASAKAAPAKAAPAKAAPAKAAPAKAAPAKAAPAKAAPA
KAARLRLPAPAKAAPAKAAPAKAAPAKAAPAKAAPAKAAPAKAAPAKAAPAKAAPAKAAP
AKAAPAKAAPAKAAPAKAAPAKAAPAKAAPAKAAPAKAAPSEDSSSDSSSEDEEEVTVKV
APAKSTPTGTPGKAAESSSDSSSEDEKEAKKPVAKATPAKATPAKATPAKATPAKATPAK
ASPAKAAPAKKADSSSSDSDSSSEDEAPAKPAAATKKPAAATKKPAAATKKPAAATKVPA
KAAAESSSDSDSSSEDEAPAKKATPAPVTKPASKPASKPASPVVKPAAAESSSDSDSSED
EAPAKKATPAPVTKPASKPASKPGSKPATPVVNKLAPTKAVAESSSDSDSSEDEVTAAKK
TTKPTAAAKTPASAKTPASAKAAESSSSDDSSSDEEEAATASTKAATPKASSTPAAKATT
PAKAAESSSSQDSSSEEEEAKAPAAVTTPITNGKRKRDGEDSSSESEEEEEVTTPKNQKV
LPAPQTYPKVSKKINVPFRRIVEEEIEVDNRLADNSFDAKRGSDGDWGQRANDVLRFTKG
KSFRHEKTKKKRGSYRGGAISQSVNSIRFDSD
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atggcagaacaaaattcagtgccgagtgatctttacaagcatgtatattcatttctacta
gagaacaagtttaccaaggctgctcaacacttcatcaaacaagctaaagtgccaccccag
aatgaaaaacaagatgccggtctgcttgacatattcaacttctgggtgaagtctcctgaa
gctaagaaacggaaggcgctgcccaacggtcctggaacaagtgacaggccgtctgctaag
aaggcaaagactgcggagagctccagtgaggagtcgagcagtgaggaggaggaggaggaa
gctgcagcacctgccaaggccacacccacagctacagcggccgagtccagcagcagcgac
gattccagcgacgaggaggccgcagcgaagaagcctgcagcagccaaagcctcggtgaag
actcctgtcgctgcagcagccaaagcctcggtgaagacccctgtcgtggcagcagccaaa
gcctcggtgaagacccctgtcgtggcagcagccaaagcctcggtgaagacccctgtcgcg
gcagcagccaaagcctcggtgaagacccctgtcgtggcagcagtcaggaaaaaggactcc
agctcgagcagtgagtcatctgaagatgaggctccagctaaatcccctgtggctagtgag
tacatcgaacctaaaggaaaagctgcagccgcgacccctaaggcagccgcgacccctaag
gcagggacaaccgccaaagcagtagctcagaagaaggctgagaccagcagcagtgaggac
agctcaagtgaagacgaagcgcctgctaagacccctccagctaagacccctgctaaggca
gccgagtctagcagcgatgactcttcttcagatgaagaggagactcctcccagcaagaag
gctaaaccaggtgaatacagtgcagttccaccccctggagctgccgtaaagaaggccttg
gctcctgcggtggccagaaaggccaaaaaggaccgctcctcagacaccagggaggaggaa
gtgtcagcagtccctgtgaagtctaccccagcaaagactgtgacccctaaacctgctgct
gctgctaagggcgagtccagctctgagagctcagactctagctctgaagaggaagaagca
aaaaaggcatcggctaaggctgccccggctaaggctgccccggctaaggctgccccggct
aaggctgccccggctaaggctgccccggctaaggctgccccggctaaggctgccccggct
aaggctgcccggctaaggctgcctgccccggctaaggctgccccggctaaggctgccccg
gctaaggctgccccggctaaggctgccccggctaaggctgccccggctaaggctgccccg
gctaaggctgccccggctaaggctgccccggctaaggctgccccggctaaggctgccccg
gctaaggctgccccggctaaggctgccccggctaaggctgccccggctaaggctgccccg
gctaaggctgccccggctaaggctgccccggctaaggctgccccggctaaggctgccccg
tcagaagattcttcctcggactcgagctcagaggatgaagaagaggtgacagtgaaagtg
gcaccagctaagtcgactcctacggggaccccaggcaaggctgcagaatcctcctctgac
tcaagctcggaagatgagaaagaagctaagaagcctgttgccaaggcaactcctgccaag
gccactcctgccaaggccactcccgccaaggccactcccgccaaggccactcctgccaag
gcctcccctgccaaggccgcccctgctaagaaagcagactcgtcaagctcagactctgac
agcagctctgaggacgaggccccagccaaacctgcagcagctaccaagaaacctgcagca
gctaccaagaaacctgcagcagctaccaagaaacctgcagcagctaccaaggtcccagcc
aaggctgctgcagaaagcagctcggactccgactcttcgtctgaagatgaggctccagct
aagaaggctaccccggcccctgttactaaaccagcctctaaaccagcctccaaaccagcc
tccccagttgttaaaccagctgctgcagaaagcagctcggactccgactcttctgaagat
gaggctccagctaagaaggctaccccggcccctgttactaaaccagcctctaaaccagcc
tccaaaccaggctccaaaccagccacccccgtggtgaataaactagccccaaccaaggcc
gtagccgagagcagctccgattctgacagctcggaggacgaggtcactgcagccaaaaag
accaccaaacctacagccgcagccaagactcctgcttcagccaagactcctgcttcagcc
aaagctgcagagtccagcagcagtgacgacagctctagtgatgaggaagaggcagcaaca
gcctcgactaaggcagctacacctaaagcctcctccacccctgctgccaaggcaacaaca
ccggctaaggctgctgagtcgtcatcgtcccaggacagtagctctgaggaagaggaggcg
aaagcaccggcagcagtcaccactcccatcactaacggcaagcgaaagagggatggagaa
gactcgtcttctgagagcgaggaggaggaggaagtaacgacgcctaaaaaccagaaagta
ttaccagcaccacagacttaccccaaagtctctaagaagatcaatgtacctttccgtaga
atagtagaggaggaaattgaagtggacaaccgtctggcagacaactccttcgatgccaag
cgcgggtcggatggagactggggccagagggccaatgacgtgctccgcttcaccaagggg
aagtccttccgtcacgagaagaccaagaagaagaggggaagctaccgcggaggagccatc
tcccagtccgtcaactccattaggttcgacagcgactga
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