Oncorhynchus tshawytscha (Chinook salmon): 112237352
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Entry
112237352 CDS
T05605
Name
(RefSeq) progranulin-like isoform X1
KO
K23879
progranulin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112237352
Membrane trafficking [BR:
otw04131
]
Endosome - Lysosome transport
Others
Others
112237352
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Gene cluster
GFIT
Motif
Pfam:
Granulin
Arm_3
Motif
Other DBs
NCBI-GeneID:
112237352
NCBI-ProteinID:
XP_042183657
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Position
LG09:84603797..84613431
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AA seq
899 aa
AA seq
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MQRYLVLCMALLAQVSADDCPGGEVCEEGNTCCKGPSDGYECCPMYQAECCEDHIHCCPE
GTLCVVNESMCVNGTVSLPWVERVSAKQSIYAKSFRMISAYAGDEDDNICPDKSHCPEEF
SCLKATTGYGCCPVAHAVPCSDGKHCCPEGHQCSTDCSSCIKQTEPVVAVMCSDRESECP
EGTTCCETPDGSWGCCPMPKAVCCEDKIHCCPEGSTCDIKQSKCISTTNKEMPMWAKFPA
RKRAEWENQNEVAQVTTPIPDTTTSANRSPASLWEGTFPPFIRTGDVPCDESTACLDGTT
CCKTQEGGWACCPLPQAVCCSDFIHCCPHGKKCNQAAQTCDDPSGSPSEPWLKKVPAVPL
EGKLPGDVTCDPTNVCPDNTTCCKTASGGWACCPLPEAVCCEDHEHCCPHGTTCDLAGLT
CDGPSGSEPMVGKVPALTTLAPDHEEAATDWQGVQMDDMELPTEDDKDVPCDETTACLDG
TTCCKTQEGGWACCPLPQAVCCSDFIHCCPHGKKCNQAAQTCDDPSGSPSEPWLKKVPAV
PREGKLPGDVTCDPTNVCPDNTTCCKTASGGWACCPLPEAVCCEDHEHCCPHGSTCDLAT
FTCDGPSGTEPMVVKVPALTTQAPDHEEAPADHQGVQMDDMELPTEDDDSEEDEELHRTQ
CDAHTSCPKDATCCFMKSTQKWGCCPLPQAVCCADGEHCCPKDYICDMSKTSCSKGGVVI
PWYNKLAAEQDDSALTAPLSVKCDTQNRCPEGSSCCQLSTGQWGCCPLRKAVCCADEEHC
CPQGYSCNMGSGTCQKLMFLQFQTVPLTRVSAPEPPTPQEKEIHCGGPFVCNNEETCCKV
SATTWACCPVPNAVCCSDMKHCCTTGYTCGEGGSCTQSTGFKWDHWQVFFSNKKRALRV
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggtatctggtgctctgtatggccctgctggcccaggtctctgctgatgactgc
ccaggcggagaggtgtgtgaggagggcaacacctgctgcaagggcccctccgatggctat
gaatgttgcccaatgtatcaggctgagtgctgtgaggatcatatccactgctgccctgag
ggaacactgtgcgttgtgaatgagtccatgtgtgtgaatggaactgtctccctaccatgg
gtggagagagtctctgctaaacagtccatatacgctaaatctttcagaatgatcagtgca
tatgccggggatgaggatgataacatctgccctgacaagtcccactgccctgaagagttc
tcctgtctgaaggccactacaggctatggttgctgtcctgttgctcatgctgtgccttgc
tctgatgggaaacattgctgtcctgaaggccaccagtgcagcacagactgcagctcctgc
atcaaacagacagagcctgttgttgcagtgatgtgcagtgacagagagtctgagtgccca
gagggaaccacatgctgtgagactccagatgggagttgggggtgctgccccatgcccaag
gctgtgtgctgtgaggataagattcactgttgtcctgagggcagcacctgtgacatcaag
caatccaagtgtatatccactaccaacaaggaaatgcccatgtgggctaagttccctgcc
cgcaagagggcagagtgggaaaaccagaatgaagttgcccaggtgacaacacctattcca
gacactaccacctcagccaataggagtcctgcttctctttgggagggtacttttccaccc
ttcattaggacaggagacgttccctgtgatgagtcaacggcctgtttggatggaaccaca
tgttgtaaaacacaggaaggaggatgggcatgctgtcctctgccacaggcagtttgctgc
agtgacttcatccactgctgcccacatggtaagaagtgcaaccaggctgcccagacgtgt
gacgacccctcaggctccccctctgagccctggctgaagaaggttcctgccgtgcctctg
gagggtaaattgccaggagatgttacctgtgaccccaccaacgtgtgtcccgacaacacc
acctgctgcaagacagcgtcaggaggctgggcctgctgccccttgcctgaggctgtttgc
tgtgaggaccacgagcactgctgtccccatggcaccacctgtgacctggctggcctcacc
tgtgatggtccctcggggtcggagcccatggtggggaaggtgccagctctcacaaccctg
gcacctgatcatgaagaggcagccacagactggcaaggggtgcagatggatgacatggag
ctgcctacagaggatgacaaagacgttccctgtgatgagacaacggcctgtttggatgga
accacatgttgtaaaacacaggaaggaggatgggcatgctgtcctctgccacaggcagtt
tgctgcagtgacttcatccactgctgcccacatggtaagaagtgcaaccaggctgcccag
acgtgtgacgacccctcaggctccccctctgagccgtggctgaagaaggttcctgccgtg
cctcgggagggtaaattgccaggagatgttacctgtgaccccaccaacgtgtgtcccgac
aacaccacctgctgcaagacagcgtcaggaggctgggcctgctgccccttgcctgaggct
gtttgctgtgaggaccacgagcactgttgcccccatggcagcacctgtgacctggctacc
ttcacatgtgatggcccctcagggacagagcccatggtggtgaaggtgcccgccctcaca
acccaggcacctgatcatgaggaggcacccgcagaccaccagggggtgcagatggacgac
atggagctgcctacagaggatgatgacagtgaggaagacgaggagttgcacaggacacag
tgtgacgcccacaccagctgcccaaaggacgctacctgctgctttatgaagtccacccag
aaatggggctgctgcccactgccacaggcagtgtgctgtgctgatggagagcactgttgt
cccaaagactacatatgtgatatgagcaagacttcctgctctaagggtggggtggtgatc
ccatggtacaacaagctggcagctgagcaagatgacagtgccctcactgcccccctctct
gtgaagtgtgacacccagaacagatgccctgaaggctccagctgctgccaactttccaca
ggacagtggggctgctgccccctgcgcaaggctgtgtgctgtgcagatgaggagcactgc
tgtccacagggctacagctgtaacatgggctcagggacttgccaaaagctcatgtttctt
cagttccagacggtacccctaactcgggtgtctgcgcctgagcccccgaccccacaggag
aaggaaatccactgtggggggccgtttgtctgcaataatgaggagacatgctgcaaggtc
tccgccactacatgggcctgctgtcccgttccaaatgcggtgtgctgcagtgacatgaag
cactgctgcactacaggctacacctgtggtgagggagggtcctgcacccagtccactggc
ttcaaatgggaccactggcaggtgttcttctccaacaagaagagagccctgcgtgtgtga
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