Oncorhynchus tshawytscha (Chinook salmon): 112237390
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Entry
112237390 CDS
T05605
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-3-like
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04080
Neuroactive ligand-receptor interaction
otw04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112237390
04082 Neuroactive ligand signaling
112237390
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112237390
Ion channels [BR:
otw04040
]
Ligand-gated channels
GABA-A
112237390
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
112237390
NCBI-ProteinID:
XP_024261750
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All DBs
Position
LG06:1637273..1689447
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AA seq
488 aa
AA seq
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MLERSQEMFGLQRRGEFDILSVSLIVALMCCAQSANEPGNMSFVKETVDKLLKGYDIRLR
PDFGGKPVSVGMSLDVANIDMVSEVNMDYTLTMYFQQYWRDKRLAYAGIPLNLTLDNRVA
DQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQ
NCTLEIESYGYTTDDIEFYWKGGENAVTGVTRIELPQFSIVDYKLVSRNVVFSTGAYPRL
SLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTLTTINTHL
RETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYVFFGRGHRMQKKLAEKVNNDRAAK
FDGNRVTFTPSEMVDSQGNILLTTLEIHNEVGAGNEITTSITETTTRNSTSMIFNQSGLQ
YRKPSALSGRERNAHAHVKKTRLRRRSSQFLIKIPNLTDVNSIDRWSRVVFPFTFTLFNF
IYWLYYVN
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgttggagagatcacaagaaatgtttgggttgcagagaagaggggaatttgacattctc
tctgtgtcactcatagtggcgttgatgtgctgtgcgcagagcgccaacgaaccagggaat
atgtctttcgtaaaggagacggtggacaaactgttgaaggggtatgatatccgccttcga
ccagactttggaggcaaaccggtttctgttggcatgagtttagatgtggcaaacatcgac
atggtgtcagaggtcaacatggactacacgttgaccatgtacttccagcagtactggagg
gacaagaggctggcgtacgctgggatccccctcaacctgacgctggataaccgggtcgcc
gaccagctctgggtccccgacacctacttcctcaatgataagaagtcctttgtgcatggg
gtcaccgtgaagaaccgtatgatccgactgcatccggacggcaccgtgctctacggactg
aggataacaacgactgctgcctgtatgatggacctgaggagatacccactggacgaacag
aactgtactctggagatagagagctatggctacaccacagatgacatcgagttctactgg
aaagggggggagaatgctgtgacaggagtgactcgcatcgagctgcctcagttctccatc
gtggactacaaactggtttccaggaatgtggtcttttccacaggtgcctacccacgtctg
tctctgagcttcaagctaaagaggaacatcggctacttcatcctgcagacgtacatgccc
tccatcctgatcaccatcctgtcctgggtctccttctggatcaactacgacgcctccgct
gccagagtggctttaggtatcaccacggtgttgaccttgaccaccatcaacacccatctg
agagagacgctccctaagatcccctacgtcaaggccattgacatgtacctgatgggctgc
ttcgtgttcgtcttcctggctctgctggagtacgccttcgtcaactacgtcttcttcgga
cggggccatcggatgcagaagaagttggcagagaaggtcaacaatgacagggcggccaag
ttcgacggcaacagggtaacgtttaccccctcagaaatggttgactctcagggcaacatc
ctcctgacaaccctggagatccacaatgaagttggcgccggcaatgagatcacaaccagc
atcactgagacaaccacacggaactccacctccatgatattcaaccaatcaggcctccag
taccgaaaaccgagtgctctgagtggccgggagagaaacgcccatgctcacgtgaagaag
acacggctacgcaggcggtcctctcaattccttatcaaaatccccaacctgacggacgtg
aactccatcgatagatggtcacgggttgtcttccccttcacctttaccctcttcaacttc
atctactggctttactacgtcaactag
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