Oncorhynchus tshawytscha (Chinook salmon): 112237410
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Entry
112237410 CDS
T05605
Name
(RefSeq) STAM-binding protein-like A
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112237410
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otw01002
]
112237410
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112237410
04121 Ubiquitin system [BR:
otw04121
]
112237410
Enzymes [BR:
otw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112237410
Peptidases and inhibitors [BR:
otw01002
]
Metallo peptidases
Family M67
112237410
Membrane trafficking [BR:
otw04131
]
Endosome - Lysosome transport
Others
Others
112237410
Ubiquitin system [BR:
otw04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
112237410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP8_dimer
JAB
Prok-JAB
MRP-S27
Amidase
Motif
Other DBs
NCBI-GeneID:
112237410
NCBI-ProteinID:
XP_042176143
UniProt:
A0AAZ3P8V7
LinkDB
All DBs
Position
LG04:1105729..1139418
Genome browser
AA seq
424 aa
AA seq
DB search
MADHTDVSLPPEDRVRALTKKGSSVDVNEDVPPRRYFRSGVEMIRMANTYTEEGNAEHAF
VLYNKYITLFIEKLPKHRDYKTANIPEKKDTLKRLKEVAFPQAEVLKKALLKIYEQEHAQ
YLSKKKAEEATLAQQQSKQQALEAERERVVELQRRQREQEQFSAFEEMIRRQELEKERQR
ILQEFHAPGTPPPDAPLLPGIQGPPLPLAVSPTPPQSPGDSAGQVRPLPTFDRTLKPVSP
SGNSNTMDGMVDGIRQLAVPSELCSSFLRLAESNTSRAVETCGILCGKLLRNAFTVTHVI
VPKQNGGPDYCDTENEEELFLIQDQYDLITLGWIHTHPTQTAFLSSVDLHTHCSYQLMMP
EAIAIVCSPRFNETGYFRITDRGMDEISTCKQKGFHPHSKDPPLFTGAGHITVTEDRVTM
LDLR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccacactgatgtcagcctgccccctgaggaccgtgtccgtgccctgaccaag
aagggcagctctgtggacgtgaacgaggacgttcctccccggaggtacttcaggtcaggc
gtggagatgatccgtatggccaacacctacaccgaggagggcaacgccgagcacgccttc
gtactctacaacaagtacatcacgctcttcattgagaagcttcctaaacatagagattac
aaaacagccaacattccagagaagaaggacaccttgaagaggctgaaggaggtggccttc
cctcaagcagaggtgctgaagaaggctcttctcaagatatatgagcaggagcatgcacag
tatctcagcaaaaagaaagcggaggaggcaaccttggcgcagcagcagtcgaagcagcag
gcgctagaagcagagcgagagcgtgtggtggaactgcagcgacgccaacgggaacaagag
cagttcagcgccttcgaggagatgatcagacggcaggagctggagaaggagaggcagcgt
atccttcaggagtttcatgctcctgggacccctccccccgatgcacccctactcccaggg
atccagggcccccctctgcccctggccgtgtcccccaccccccctcagagcccgggggac
agcgccggccaggtcagaccgctccccaccttcgaccggacgctcaaacctgtgagccct
agtgggaacagcaacaccatggatgggatggtggatggcatccggcagctggcagtgccc
tcagagctctgcagcagcttcctcaggctagctgagtccaacaccagccgagctgtggag
acctgtggcatcctctgtggcaaactgctgaggaatgcgttcacagtgacccatgtgatc
gtgccgaagcagaacggagggccagactactgcgacacggagaacgaagaggagctgttc
ctgatccaggaccagtatgacctcatcaccctgggctggatacatacccaccccacccag
acagccttcctgtccagtgtcgatctccacacacactgttcctaccagctcatgatgccg
gaggctatcgctattgtctgctcacccaggttcaacgagacgggctacttcaggataaca
gaccgtgggatggatgagatctcaacgtgtaaacagaaaggtttccaccctcacagcaaa
gaccctcctctcttcactggagcaggacacatcaccgtcaccgaggacagagtcaccatg
ttggacctgcggtga
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