Oncorhynchus tshawytscha (Chinook salmon): 112237436
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Entry
112237436 CDS
T05605
Name
(RefSeq) AP-3 complex subunit delta-1 isoform X1
KO
K12396
AP-3 complex subunit delta
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
112237436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112237436
Membrane trafficking [BR:
otw04131
]
Endosome - Lysosome transport
Others
AP-3 complex
112237436
Endosome - Golgi transport
112237436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP3D1
Cnd1
HEAT
INTS1_R4
HEAT_2
PDS5
RTP1_C1
RasGEF_N_2
TOR1L1_N
Vac14_Fab1_bd
gpW
Motif
Other DBs
NCBI-GeneID:
112237436
NCBI-ProteinID:
XP_024261827
LinkDB
All DBs
Position
LG01:complement(20020122..20063622)
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AA seq
1241 aa
AA seq
DB search
MALKIVKGSIDRMFDKNLQDLVRGIRNHKEDEAKYISTCIDEIKQELKQDNIAVKSNAVC
KLTYLQMLGYDVSWAAFNIVEVMSSSKFTYKRIGYLAASQCFHESTDVIMLTTNQIRKDL
SSPNQYDTGVALTGLSCFVTPDLARDLANDIMTLMSHTKPYIRKKAVLIMYKVFLKYPES
LRPAFPRMKEKLEDPDPGVQSAAVNVICELARRNPKNYLSLAPLFFKLMTSSTNNWVLIK
IIKLFGALTPLEPRLGKKLIEPLTNLIHSTSAMSLLYECVNTVIAVLISLSSGMPNHSAS
IQLCVQKLRILIEDSDQNLKYLGLLAMSKILKTHPKSVQSHKDLILQCLDDKDESIRLRA
LDLLYGMVSKKNLMEIVKKLMLHVDKAEGTTYRDELLTKIIDICSQSNYQYITNFEWYIS
ILVELTRLEGTRHGHLIASQMLDVAIRVKAIRAFAVAQMATLLDNAHLLTGNTQHSGICE
VLYAAAWICGEFSEHLEDPMATLEAMLRPKVATLPGHIQAVYVQNAAKLFSTVLCGQEGA
PADSKVAQETSQLLIDRLPVFVQSDNLEVQERASCILQLVKYIQKLQQKDVEVAEEVTAL
FAGELNPVAPKAQKKVPVPEGLDLDAWINEPPSGSESEDEGRKTKGKAVFAREESRHTKP
RYTEVDEKELAKRREVRKAEQANNPFYIKASPSSQKVYQEAVGVEHIPVVQIDLSVPLKV
PGMPMSDQYVKLEEERRQKNKADRKKDKKKRREKGRQRRGDSGPESEEDITPAHMVDIVT
EEMPENALPSDDDDKDPNDPHKALNIDLDKPLADSEKKLPVRTHRPDEVLKSPIEDAEGL
EVTSEPKKKSGKEKKDKERKKGKEKKKKKKHKQEEGEDLMEAGSEEPVQSKVTNDVAAQP
PASTPEASDLDFWLSNAPVPSDPQEAAAVTDAPPASTPDAASGVAAVVPDSETKSSKHKK
KQKKEKDKKKKHHHHHHSDGAREESVQNGTVEDEEPLPPMSNYALLAENSYIKMMKQDAD
EVCDIQGNLHDGSQVVVSVIFENKCDSFIKSMEFNVMDSLNSKLQRPEGAGPHDSLTVPF
HLPPGISSEARFIFSVQSIVMPQKLKGTLTFIVKTEDSSTHEKLDFKLHFTCTSYLITTP
CYSDAYAKLLESGDLKGSSLKLEGINQPFHHLLARICFHHHFSVVERIDSCASMYSRSIQ
GHHVCLLVKTADQTVSIDAKCDEPGLLRNVLDEIKLTFSQC
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgaagattgttaaagggagcatcgatcggatgttcgataaaaaccttcaagat
ttagtacgtggcattaggaatcacaaggaagatgaggctaaatacatctccacctgcatc
gacgagatcaagcaggagctcaagcaggacaatattgctgtcaagtccaatgccgtctgc
aagctcacctacttgcagatgctgggctatgacgtcagctgggctgcattcaacattgtg
gaagtcatgagctcctccaaattcacatacaagagaattggttacctggccgcctcccag
tgctttcatgagagcactgatgtaatcatgctgacaaccaatcagatccgaaaggatctg
agcagtcctaaccagtacgacaccggcgtggctctcactggcctctcctgcttcgtgacc
cctgacctggctcgggatctggccaatgacatcatgactctgatgtcccacacaaagcct
tatatcaggaagaaggcagtcctgatcatgtacaaggtgttcctgaagtacccggagtct
ctgcgcccagctttccccaggatgaaggagaaactggaagatcctgaccctggggtccag
tcagcggctgttaatgtcatctgtgagctggccaggaggaaccctaagaactacctttct
ctggccccgcttttcttcaagctcatgacctcctccaccaacaactgggtcctcatcaag
atcatcaagctgtttggtgccctcacacccctggagcctcgtttggggaagaagctgata
gaacccttaacaaacctcatccacagtacctctgctatgtcacttctatatgaatgtgtc
aacactgtgatagcagtgttgatttccctgtcctctgggatgccaaatcacagtgctagt
attcagctctgtgtccagaaactgcgaatcctgattgaagactcggaccagaacttgaag
tacctgggcctgctggccatgtccaagatactgaagactcatcccaagtctgtccagtcc
cacaaggacctcatcctccaatgtctggatgacaaggacgagtccatccgcctgagggct
ctagacctgctctacggcatggtgtccaagaagaacctgatggagatagtgaagaagctg
atgctgcacgtggacaaagccgagggaaccacttacagagatgagctgctcaccaagatc
attgacatctgcagccagagcaactaccagtacatcaccaactttgaatggtacatcagt
atcctggtggagctgacccgtctagagggcacgcggcacggccacctcatcgcctcccag
atgctggacgttgccatccgggtgaaagccatccgagccttcgccgtggcccagatggct
actctgctggacaacgcccacctgctgaccggcaacacacagcacagtggcatctgtgag
gtgctctacgccgccgcctggatctgtggagagttctcagaacacctggaggaccccatg
gcgactctggaggccatgctgcgtcccaaggtggccaccctgccgggccacatccaggcc
gtgtacgtgcagaacgctgccaagctgttttctacggtgctgtgcggccaggagggggcg
ccagcggacagcaaggtggcccaggagaccagccagctgctcattgacaggcttcctgtg
tttgtccagagtgacaacctggaggtgcaggagagggcctcctgcatcctgcaactggtg
aagtacatccagaagctgcagcagaaggacgtggaggtggctgaggaggtgacagctctg
tttgctggagagctcaaccctgtggcccccaaggcacagaagaaagtgcctgttcctgaa
ggtctggacctggatgcgtggatcaacgagcctccgtctgggagtgagtctgaggatgag
ggtaggaagaccaagggcaaggctgtgtttgccagggaggagtccagacacaccaagcca
cgctacactgaagtggacgagaaggaactggctaagaggagagaagtaaggaaggcagag
caggccaacaaccccttctacatcaaggcctccccgtcctctcagaaggtataccaggag
gctgttggtgtggagcacattccagtggtgcagattgacctcagtgtgcctctcaaagtc
ccagggatgccaatgtcagaccagtatgtgaagctggaagaggagcgtcggcagaaaaac
aaggcagacaggaagaaggacaagaagaagaggagggagaagggccggcagaggaggggg
gactcgggcccagagagtgaggaggacatcacccccgcacacatggtggacatcgtcact
gaagagatgccagagaatgccttgcccagtgatgacgatgacaaagatcccaacgacccc
cacaaagctttgaacatcgacctggacaagcccctggcagacagcgagaagaagctgcca
gttaggacacaccgtcccgatgaggttctcaagagccccatagaggacgcggaggggttg
gaggtcacttcagagcccaagaagaagagcgggaaggaaaagaaggacaaggagaggaag
aagggtaaagagaagaagaagaagaagaaacacaaacaagaggaaggggaggatcttatg
gaggctgggtcagaggagcctgtccaatcaaaagtgaccaacgatgtggcagcccagcct
cctgcctccacaccagaggcttcggatctggatttctggctctcaaatgctccagtgccc
tctgaccctcaggaggccgcagcagtaacagacgctccccctgcatccactcctgacgct
gcatctggtgtggctgccgtggtcccagactctgagactaaatcctccaagcataagaag
aagcagaaaaaggagaaggacaagaaaaagaagcaccatcatcatcaccatagcgatgga
gccagagaggagtctgtgcagaacggcacggtggaggacgaggagcctctgccacccatg
tccaattacgccctgctggctgagaactcctacatcaagatgatgaagcaggatgctgat
gaggtgtgtgacatccaggggaacctgcatgatggtagccaggtggtggtctctgtcatc
tttgaaaataagtgtgacagtttcatcaagtccatggagttcaatgtgatggactctctc
aactccaagctgcagcggcctgagggagccggcccacatgacagcctcaccgtgcccttc
catctgccccccgggatctctagtgaggcacggttcatcttctcagtgcagagcattgtg
atgcctcagaaactgaagggaaccctcaccttcatagtcaagactgaggattcctccact
cacgagaaactagactttaaactgcactttacctgcacctcatacctgatcaccactccc
tgctacagtgacgcgtatgctaagctgttggagtcaggggacctcaagggaagctctctg
aagctggagggaatcaaccagcctttccaccatctactggctaggatctgcttccaccac
cacttctctgtggtggagaggattgattcctgtgcctccatgtacagcaggtcaatccag
ggtcaccatgtgtgtctgctggtcaaaactgctgatcagaccgtgtctatcgatgctaaa
tgtgacgagccgggcctgcttaggaatgtgctggatgagatcaagctgaccttctctcaa
tgctga
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integrated database retrieval system
