Oncorhynchus tshawytscha (Chinook salmon): 112237500
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Entry
112237500 CDS
T05605
Symbol
lhfpl4b
Name
(RefSeq) LHFPL tetraspan subfamily member 3 protein isoform X1
KO
K23893
LHFPL tetraspan subfamily member protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112237500 (lhfpl4b)
03037 Cilium and associated proteins [BR:
otw03037
]
112237500 (lhfpl4b)
Transporters [BR:
otw02000
]
Other transporters
Pores ion channels [TC:
1
]
112237500 (lhfpl4b)
Cilium and associated proteins [BR:
otw03037
]
Other cilia and associated proteins
Stereociliary proteins
112237500 (lhfpl4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
L_HMGIC_fpl
Claudin_2
Motif
Other DBs
NCBI-GeneID:
112237500
NCBI-ProteinID:
XP_042155754
LinkDB
All DBs
Position
LG16:85789257..85804946
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AA seq
225 aa
AA seq
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MAMTPHTAEVARLYQTEFIRSARAVGVLWAVCTLCFAIIEVVILIQPSWVGTREVHYQGG
GPVPKTGTLGLFEVCVESDWPVPECRGSLSTLTPLPAFQSPAVLVCMSLTMVWSSVGCLS
LFRFCNAATVYKICAWLQLTAGFCLALACVLFPDSWDCADMRDLCGDGVTSFSSGNCSVH
WAFVLALLGVLDAAILATLAFVLGNRQDALLPEDTKDVTGFLLSA
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgaccccccacaccgctgaggtagctcgtctctaccagacagagtttatccgt
agcgcccgggcggtgggcgtcctctgggctgtgtgtaccctctgcttcgccatcatcgag
gttgtcatcctaatacagccctcctgggtgggcaccagagaggttcactaccagggaggg
gggcccgtgccaaagactggtaccctgggactgttcgaggtgtgtgtggagtctgattgg
ccggtcccagagtgtcgtggctcactgagcactctgacccccctcccagccttccagtcc
cctgctgtgctggtttgcatgtccctgaccatggtctggagcagcgtcggctgcctctcc
ctcttcagattctgtaacgccgctaccgtctacaagatctgtgcttggctgcagcttact
gcagggttctgcctggctctcgcctgcgtgctgttccctgactcgtgggattgtgcggac
atgcgggacctgtgtggtgacggggtgaccagtttctcctccggaaactgctctgtccac
tgggcctttgtcctggccttgttgggggtcctggatgctgccattcttgccactctggcc
tttgtactgggcaaccgacaggacgctctgctaccagaggacaccaaggatgtgacaggg
tttctgctgtctgcttag
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