Oncorhynchus tshawytscha (Chinook salmon): 112237527
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Entry
112237527 CDS
T05605
Symbol
zeb2a
Name
(RefSeq) zinc finger E-box-binding homeobox 2a isoform X1
KO
K23560
zinc finger homeobox protein 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112237527 (zeb2a)
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
112237527 (zeb2a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-Di19
zf-C2H2_jaz
zf-met
Homeodomain
zf-C2H2_6
zf-C2HE
Csm1_N
Motif
Other DBs
NCBI-GeneID:
112237527
NCBI-ProteinID:
XP_024261917
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All DBs
Position
LG03:complement(47440426..47488085)
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AA seq
1245 aa
AA seq
DB search
MKQEIMAEGPRCKRRKQSNPQRKNVLNYENVVETGSETDEDDRTLVSEENGLTNGEEGSS
PIGAGVPNLEASPRVGHALLSYRAGAEEGSEGRDGRQSHNHAWRLADNPHGHLNGTDERK
EEYESLGPEGSLHSVGNGTVKGMDGVSGLDEYFTKRNKLEESDSHSASIAEYLQRGDTAI
IYPEAPEEVTRLGTPEAVGQDENENDLPPGTPDAFAQLLTCPYCDRGYKRLTSLKEHIKY
RHEKNEESVPCPLCSETFSHRTQLERHMATHKPGRDQPQLLNEGAGNRKFKCTECGKAFK
YKHHLKEHLRIHSGEKPYECSNCKKRFSHSGSYSSHISSKKCIGLISVNGRVRNGGGNTK
AGSSPNSTASSPGSPALAQLRHKLENGRPMGSQDQQSHLDIKAEPMDFNDYRLLMASQYG
VGGPGGYMNGAGRGGSPLGIHSSSQSPLQHLSGMGLDLPLLGYGSLGNNLSEVQKVLQIV
DNTVCRQKMDGNPEEISKLRAYMKELGAQMEEQKLALSSPRAGFQVVGHGSPTKSIIDYT
LEKVNEAKSLIDDSKRQINMDIKKERLNHSMDPEEKSHHESHQVPFLPFSCQFCKENFPG
PIPLHQHERYLCKKNEEINHLQPSEGVPPSRRGVFPSEQQAALQSSLSERGATSPINPFK
DHVSVLKAYFAMNMEPNSEELLKISIAVGLPQEFVKEWFSQWKNQQQQQQHNNGNANSRK
RSPPPDRSSAEERNHHGLARSPMSMAQHVDRIMALADLHGGNTNGDRDTSHRHLKANQFT
ANRQMGDKPLETLDHLRSSTSSPLNLSSTSSKNSQSSSYTPNSLASEGDGHGGDAPLDLS
LPKHMMSNSISLGEKRSKPNGYVSDRNGDHHQSNREQGTEPMDLAHIKKEFLGSGRDNGG
NSGHQMEKSASPIFGINPFGGGHMYTPLPPHGAFPPHSFMQAQASIPGLRPYPGLDPMSF
LPHMAYTYATGAATFAEMQHRSRKYQRKPGFQGELLDGTADYLSGLEDLTDESLLSRKKI
KKTESGMYACDLCDKTFQKTSSLLRHKYEHTGKRPHQCTICKKAFKHKHHLIEHSRLHSG
EKPYQCDKCGKRFSHSGSYSQHMNHRYSYCKREAEEREAAEREARDKGPLEPTELLMRRA
YLQGLGPLGYSDTEDQPEDGGGTILRDGTEGGMRGGRGEREVDETYEKVTVRRETGTFRE
GEDEEEDDSRMDTARNDEGKDAEHSMDESSREGKTDTKSDQEEAD
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaggagatcatggcggagggtccccggtgtaagaggcgaaaacaatccaaccca
caaagaaagaacgtgctgaactatgagaatgtggtggagacgggctccgagacagacgag
gatgacaggactctagtctcagaggagaatggtctaaccaatggggaggagggtagcagc
cccattggggccggcgtgcccaacctggaggcatcacccagggtgggccacgccctgctg
tcctacagggctggagcagaggaggggtcagagggcagggatgggcggcagagccacaac
cacgcctggcgcctggcagacaacccgcacggacacctcaacgggactgatgaaaggaag
gaggaatatgaatccttggggccagagggttctcttcactctgtaggaaatggtacagtg
aagggtatggatggggtgtcggggcttgacgagtacttcactaagcgtaataaactggag
gagagtgacagccactcagccagcatcgctgagtacctgcagcgtggagacactgccata
atttacccagaagccccagaggaagtgacacgactcggaactcccgaggccgttgggcaa
gatgaaaacgaaaacgacctgccacctgggactccagatgctttcgcccaactgttgacc
tgcccttactgcgaccggggctacaagcggctgacatcgctcaaggagcacatcaagtac
cgccatgagaagaacgaggagagcgtgccctgcccgctgtgcagtgagaccttctcccac
cgcacacagctggagaggcatatggccacgcacaagccagggagagatcagccccagctt
ctgaatgaaggggccggcaaccggaagttcaaatgcaccgagtgtggaaaagccttcaaa
tacaagcatcatttgaaggagcatctccgaattcacagcggggagaaaccatatgagtgt
tccaactgcaagaagcgcttctcccactctggctcctacagctcccacatcagcagcaag
aagtgcatcggtctgatctctgtcaacggacgagtacgtaacggaggaggtaacaccaag
gctggctcctcccctaactccactgcctcctctccgggaagccccgccctggcccagctc
cgccacaagctggagaacggccgccccatgggctcccaagaccagcaaagccacctggac
atcaaggcagagcccatggacttcaatgactacaggctactgatggcctcccagtatggc
gtcggagggccagggggctatatgaacggagccggccgaggaggcagccctctggggatc
cacagctcctcccagagtcccctgcagcacctgagtgggatgggcttggatctgcccctg
ctgggctacggttccctggggaacaacctgagcgaggtgcagaaggtcctccagatcgtg
gacaacactgtgtgcaggcagaagatggatgggaacccggaggagatctccaagctcagg
gcctatatgaaggagctgggggcccagatggaggagcagaagttggctttgtcctccccg
cgtgctggcttccaggtggtgggccacggcagccccacaaaaagcataatcgactacact
ctggagaaggtgaatgaggccaagagcctgatcgacgattccaagaggcagatcaacatg
gacatcaagaaggagaggctaaaccactcgatggatcctgaggagaagtcgcaccacgag
agccaccaggttccattcctgcctttctcctgccagttctgcaaggagaacttcccaggg
cccatcccactacaccagcacgagcgctatctgtgtaagaagaacgaggagatcaaccac
ctccagcccagtgagggtgtgcctcctagccgcaggggggtgttcccctcagagcagcag
gccgctctgcaatcctctctgtcagagaggggcgccaccagccccatcaaccctttcaag
gaccacgtgtcagtgctcaaggcctacttcgccatgaacatggagcccaactcagaggag
ctgctgaagatctccatcgcagtcggcctcccacaggagtttgtcaaggagtggttctcc
cagtggaagaatcagcagcaacaacaacaacacaacaacggtaatgctaactccaggaag
cggtcgccaccgccagaccggagcagtgcagaggagcgcaaccaccacggcctggccagg
tcaccgatgtccatggcacaacacgtggatcgcattatggcactcgcggatttacacggc
ggcaacaccaacggtgaccgtgacacttcccacagacatttaaaggccaaccagtttaca
gccaacaggcagatgggtgacaaaccactagagaccttggaccaccttaggagcagcacg
tcatctcctctcaatctctcctccacttcttctaaaaactcccagagcagctcatacact
ccaaacagcctggcctctgaaggggatggccatgggggggacgcaccattggacctttct
ctaccaaaacacatgatgagcaacagcatctcactgggagaaaagaggtccaaaccaaac
ggctatgtctcagaccgcaatggtgaccaccaccaatccaaccgggagcaggggactgag
cccatggacttggcccacatcaaaaaagagttcctgggctcagggagagacaacggaggg
aacagtggccaccagatggaaaagagtgccagccccatctttggcatcaacccctttggt
gggggtcacatgtacacacctttgcccccacatggagcgttccccccgcacagcttcatg
caggcccaggccagcatcccaggcctgaggccgtacccagggctggatccaatgagcttc
ctgccccacatggcctacacttatgcaactggggcggccacatttgctgaaatgcaacac
aggtcgaggaagtaccaacggaaaccaggtttccagggggagctactggacggcactgcg
gactatctgtcaggcttggaggacctgacagacgaatcgctcctctcccggaagaagatt
aaaaagacagaaagtggtatgtacgcgtgtgacttgtgcgacaaaacattccagaagacc
agttccctcctaagacacaaatatgagcacacaggcaagcggccacaccagtgcacgatc
tgtaagaaggccttcaaacataagcaccacctcatcgagcactcgcgtctgcactcgggt
gaaaagccataccaatgcgacaagtgtggcaagcgcttctctcactcaggctcctactcc
cagcacatgaaccaccggtactcctattgcaagagggaggcagaggaaagggaggcggct
gaaagggaggcccgggataagggccccctggaacccacagagttgctgatgaggagggcc
tacctgcagggtctggggcctctgggctactctgacaccgaggaccagccagaggatggg
ggtggcaccattctgagggacggcactgaaggagggatgagaggaggacgaggagagagg
gaagtggacgagacgtatgagaaggtgacagtcaggcgagagacgggaactttcagggag
ggagaggatgaggaagaggatgacagcaggatggacacggcgaggaatgatgaggggaaa
gatgcggagcattcaatggatgagagttcaagagaagggaaaacagacaccaagtcggac
caggaagaagcagattaa
DBGET
integrated database retrieval system
