Oncorhynchus tshawytscha (Chinook salmon): 112237591
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Entry
112237591 CDS
T05605
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B-like
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04020
Calcium signaling pathway
otw04080
Neuroactive ligand-receptor interaction
otw04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
112237591
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112237591
04082 Neuroactive ligand signaling
112237591
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112237591
Ion channels [BR:
otw04040
]
Ligand-gated channels
Glutamate (ionotropic)
112237591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
112237591
NCBI-ProteinID:
XP_042174661
LinkDB
All DBs
Position
Unknown
AA seq
1395 aa
AA seq
DB search
MEYLYLLGRWMCNFFIPRIIRPYPFFTGRFLPLLVFLHGFVLHPDPCLSHPQPCHILARI
GHAVRLGALLPTGQPARVQNALNRALTSLKHRAGEGNPPLLPYNLTLEVVSRSPSGGDPV
SLSRCVCQELVVQGVTGVLAFPRSPEELIHIDFLSSFLEIPFISLLEDLEPLRVKNQFHL
QMSVRVPPSRLANLLLSVLQGRGEGLLKHLETQKGTSWNLLDIINLTHIGGEERREERGK
VERREERGEEKGAERGEETNDETREDKREAEVLSLLSRRLLRSASPLSSVVILGSDPECL
SSVLRCAQRLAPSLPTLQWIMGNPLSPDSLLSLGGPLGLLAYGEVGRKPITFYIRDALRL
IGQAVTSASEVRPDLALIQNLVNCYDKPNKEEVPSSGQYLARFLSNTSFQGSTGTVHVAP
ALSQVLSSQLYHVWSLKRGPLGQPSWVTVAHWTTERLQLDEGVLGLGVGAGLGLGPGRRT
GSGSGLGVQRGERDRDNSPGGRWRPGLQMAGRRLRVVTLVEHPFVFTREVDEDGLCPAGQ
LCLDPRTNRSDLLDSLFGHLHQTNTTTTTTDHNPTEDLRKCCYGYVIDLLEKLSEDLMFT
FDLYIVGDGKYGAMSSTGSWSGLVGDLLSGTADMAVTSFSINSARSRVIDFTSPFYSTSL
GILVRSQDTSAPIGAFMWPLHWSMWVGIFVTLHLTALFLTVYEWNSPFGMTPHGRNRLRV
FSYSSALNLCYAILFGRTVATKTPKCWTSRFLMNLWAIFCLLVLSSYTANLAAVMVGEKT
FEQVSGIHDEKLHHPSRGFRFGTVRESSAEDYMRKSFSAMHDYMRRYNQPTTPDGVDMLK
TDPPLLDAFIMDKALLDYEVSIDAECKLATVGKPFAIEGYGIGVAQGSPLTANVSEFISR
YKSEGYMDILHEKWYKVVPCGKRVFTNTENLSMGIDHFSGLFVMLCVGVVGAIFTLAAEH
TFYHLALPRLRRSHTLTYWLHTSQKIHRALNTPYEDVGKELIGLDHNPSPCVSDSCSLHR
HQQPRPPPPPSSPCLPPPPQPSSPARDIKENKRVHFDLESLHSYRLHTHTASFWGRPGMV
GRHGLGGCLGGLSPPQVSLHANGGPASALASPGLALPPLGNPGNQAFLWEGELLEVQGRI
ETFTAQLRDAVARRAEIQTCLENHKMNLSAATAVKLEKDKVGQSQSLERVRTNAEKDRTK
EEREGLNQEKGRSGRSNLCCSLDRNRDRDRTGRDSSTMRQTARQDTDRDRLLHQSETERD
RDDQSKSLDRNGSSQSHASNILQTGRNSQSEALTILQRREIQSKTSTSLDRETSNQSGAV
NTLQGERTVQSHNSTSLERGRVRQSGAVKDQERGRTVQTRTGASLDRLKASQSSAGTGNL
VRERPAPMDTQKSLC
NT seq
4188 nt
NT seq
+upstream
nt +downstream
nt
atggagtatttgtatctacttggtcgatggatgtgcaacttctttatacccaggataatt
cgcccatatccttttttcaccggaagatttctcccgctgttggtcttcctccatggcttc
gtcttgcatccggacccgtgcctctcccacccccagccatgtcacatcctggctcggatc
ggacacgcggttcgtctcggtgctctgcttcccaccggacaaccagccagggtacagaac
gctctgaacagagccttgaccagcctgaagcaccgggctggagaaggcaacccgcctctt
ctgccctacaacctcaccctggaggtggtgtctcggtccccgtctggtggcgaccctgtc
tccctgtccaggtgtgtgtgtcaggagctggttgtgcaaggggtgacaggtgtcctggcc
ttccctcgttcaccagaggagctcatccacatcgacttcctgtcctccttcctggaaata
ccttttatatcactactggaggacctagaaccactcagagttaagaaccagttccatctc
caaatgtcagttcgtgttccaccctctcgcctggccaaccttctgctctctgttctccag
gggaggggggagggactattgaaacatctagagacacagaaaggaacaagctggaatcta
ctggatatcatcaaccttacacatataggaggggaggagaggagggaggagagagggaag
gtggagaggagggaggagagaggggaggaaaaaggggctgagagaggtgaagaaacaaat
gatgagaccagagaagacaagagggaagctgaggtcttgtctctcctctcccgtcgtctt
cttcgctccgcctctcctctctcctccgtggtcatccttggttccgacccagaatgtctc
tcttctgtactccgttgcgcccagcgtctcgctccctcactccccacactgcagtggatt
atgggtaaccctctgtcacctgactctctcctttctctgggcgggcccctcggcctattg
gcttatggagaggtgggtcgtaagcccatcaccttctacatccgagacgcgctgcggttg
attggccaggcggtgacgtcggccagtgaggtgaggccagacctggctctgatccagaac
ctagtcaactgttacgacaaacctaacaaagaggaagtgccctcgtctggacagtacctg
gccaggttcctctccaacacgtcgttccagggttctacgggcacggtccatgtggcacct
gctctctcccaggtcctctcctcccagctgtaccacgtgtggagcctgaagagaggtcct
cttggccagccgtcctgggtcaccgtggcccactggaccaccgagcgcctacagctggac
gagggggtgttggggctgggggtcggggctggcctggggctaggcccagggagaaggaca
ggttccgggtctgggttaggggtccagagaggggagagggacagagacaacagtcctgga
gggagatggaggccggggctacagatggcgggccggagattaagggtcgtgaccctggtg
gagcatccgttcgtgttcactagagaggtggatgaggacgggctgtgtcccgctggtcag
ctgtgtctggacccgaggactaaccgctcagatctactggactcactgttcggtcacctg
caccagaccaatacaactactaccactactgaccacaacccaacagaggacctgcggaag
tgttgctatggttatgttattgacctgttggagaagctgtcggaggacctgatgttcacc
tttgacctttacatcgtgggagacgggaagtacggagcaatgagcagcactgggagttgg
tccggtctggtgggagacctgctgagtggaacagcagacatggctgtgacatcattctcc
atcaactcagccaggagcagagttatagacttcacctctccattctactctacctctctg
gggatactggtgcgtagccaggacacatcagcccctattggggccttcatgtggcctctc
cattggtccatgtgggtgggcatcttcgtcactcttcatcttaccgcactcttcctcacc
gtctatgagtggaacagtccctttggtatgactcctcatggcaggaacagactcagagtg
ttctcctactcctcagccctcaacctctgctacgccatcctgtttggacgcactgtcgct
actaagactcctaagtgttggaccagtaggttcctgatgaacctgtgggccatcttctgt
ctgctggtgttgtccagttatacagctaacctggctgctgtcatggtgggggagaaaacc
tttgaacaggtgtctgggattcatgacgagaagctgcaccacccatcccgtgggttcagg
tttgggacagtcagagagagctctgcagaggactacatgaggaagagtttctctgctatg
catgactacatgagacgttacaaccaacccaccacaccagacggagtggacatgttaaag
acagatcctcccctactagatgccttcatcatggataaagctctattggactatgaagtc
tccatcgatgctgagtgtaaactagcgactgtgggcaagcctttcgctatagaggggtat
ggtataggtgttgcccaaggctctcctctcactgccaacgtgtctgaattcatcagtcgc
tacaagtcagaagggtacatggacatattacatgagaaatggtacaaggtggtgccatgt
gggaagcgagtattcacaaacactgagaatttatcgatggggatagatcatttctcaggc
ctgtttgtgatgttgtgtgtgggggtggttggagccatttttaccttggcagctgaacac
accttctatcacctagccctgccccggctacggcggtcacacacactcacctactggttg
cataccagccagaagatccatcgagccctgaacaccccttacgaggacgtagggaaagag
ttgattggcctggaccacaatccctccccttgtgtctctgacagctgcagcctccacaga
caccagcagcctcgccctcctcctcccccatcttccccctgcctgccccctcctcctcag
ccctcctctcctgcccgggacatcaaggagaacaagagggtccactttgatctggagagt
ctacacagctaccgtctacacacacacaccgcctcgttctggggacgtcctggcatggtg
gggcgacacggcctgggagggtgtctgggtggtttatctcctcctcaggttagcctgcat
gctaacggtggcccagcatcggccctggcctcccccggcctggccctgcctcctctgggg
aacccaggcaaccaggccttcctgtgggagggagagctcctggaggtccaggggaggatc
gagacgttcacagcccagctgagagacgccgtggccaggagagccgagatacagacctgc
ctggagaaccataaaatgaacttgagcgcagctactgctgtcaaactggagaaagacaag
gttggccagtcacaaagcctggagagagtgagaaccaacgcagagaaagatagaaccaag
gaagagagagaggggctcaaccaggagaaagggaggagtggcagatcaaacctctgttgc
agcctggacagaaacagagacagagacaggacaggcagggacagttccactatgagacaa
acagccagacaggacacagacagggacagactgttacaccaatcagaaactgagagagac
cgagatgaccaatcaaaaagcctggacagaaatgggagcagccaatcacatgcctccaac
attctgcagacagggaggaacagccaatcagaagctctgaccatcctacagaggagagag
atccaatcaaaaacctccaccagcctggacagagagacatccaaccaatcaggtgctgtc
aatacactgcagggagaaagaactgtccaatcacataactccaccagcctggagagagga
agagtcaggcaatcaggtgcagtgaaagaccaggagagggggagaactgtccaaacacgg
acaggggctagtctggacagactgaaagctagccaatccagtgccggcactgggaatctg
gttagagaacgtcccgcccccatggacacccagaagagtttgtgttag
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