Oncorhynchus tshawytscha (Chinook salmon): 112237616
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Entry
112237616 CDS
T05605
Symbol
rab3il1
Name
(RefSeq) guanine nucleotide exchange factor for Rab-3A isoform X1
KO
K16779
Rab-3A-interacting protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112237616 (rab3il1)
03036 Chromosome and associated proteins [BR:
otw03036
]
112237616 (rab3il1)
Membrane trafficking [BR:
otw04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112237616 (rab3il1)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
Other centriole associated proteins
112237616 (rab3il1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec2p
SLFN-g3_helicase
SpGH101_helical
AviRa
Motif
Other DBs
NCBI-GeneID:
112237616
NCBI-ProteinID:
XP_042177396
LinkDB
All DBs
Position
LG01:5460977..5491232
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AA seq
479 aa
AA seq
DB search
MDAFEGLHSVRLSSSPPLASVTNSGYEILVSARSGIQVYSNATFYGKPSVLEQAQKRGRA
KYHSHREETKEERCEVGRLVDLEPGPIPRVEGGGQGDPRPTRPQEQGTQARGREGSRLER
AAQLEGARGGEHEDNVSRLRSSSLEIREKGSEILREQLDAAQKELKLKDKECERLSQIRD
QLEQELEELTASLFEEAHRMVREANVKQATAEKQLKEAQGKSDVLQAEVSALKTMVLTST
PSSPNRRAHPQLLSPGTRSRGSSPHHGGGHARNKSASGALPLAPGGHSDLPSDLQPVRED
KEMDSILYAEFLTWKNRPSLDRSSAFLVRIYREDIGPCLSFTRSELSQSVQSAVENNSLT
IEPVAMSALSMVKANAIECGGPNGLKAAVEMKCALSGISRSCKHQIKLGDEESYYYISPS
SRARVPSNHITAVCNFFTYIRYIQQGLVRHDAEQMFWEVTRLRREMTVAKLGFYLTDQE
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgtttgagggtctccacagtgtccggctgtcctcctctccaccccttgcctct
gtcaccaattcagggtatgagattctcgtatcagccagatctggtatccaggtatactcc
aacgccacgttctatggtaaacccagtgttctagagcaggctcagaagagagggagagcc
aaatatcactcccaccgagaggagactaaagaagagaggtgtgaggttggaaggttggta
gacctggagccaggtccaatccccagggtggagggtggagggcagggtgaccccaggccc
accaggccccaggagcagggtacccaggccagggggagagagggtagcaggctggagcgt
gctgcccagctggagggtgcccggggcggggagcatgaagacaatgtgtcccgcctccgg
agctcttccctggagatcagagagaagggatcagagatcctcagagagcagctagatgct
gcacagaaggagctgaagctgaaggataaggagtgtgagcgtctgtcacagatccgggat
caactagagcaggagttggaggagctaactgccagtctgtttgaggaagctcacaggatg
gtgcgtgaagccaacgtgaaacaagcaacagcagagaaacagctgaaggaggctcaggga
aagagtgatgttctgcaggcggaggtgtcagccctgaagaccatggtcctgacctccacc
ccgtcttcccctaaccgccgggcccaccctcagctcctctccccgggcactaggtccagg
ggttccagcccccaccatggagggggacacgcacgcaacaagagtgccagtggtgccctc
ccattggcccctggtgggcactcagacctgccctctgacctgcaaccagtcagagaggac
aaagagatggacagcattctgtatgcagagttcttgacctggaaaaacagacctagtctg
gacagaagttcagccttcctggtgcggatatacagggaggacatcggcccctgcctctcc
ttcacacgatctgagttgtctcagtcagtccagagtgcagtggagaacaactctctaacc
atcgagccggtggccatgtcagctttatccatggtcaaggccaacgccatagagtgtggc
gggcccaatggcttgaaggcagcagtagagatgaagtgtgcgttgagcggcatatcccgg
tcctgtaagcaccaaatcaaactgggtgacgaagagagttactactatatctcaccctcc
agcagggcacgggtacctagcaaccatatcacagccgtgtgtaacttcttcacctatatc
cgctatattcagcagggcctggtcagacatgatgcggaacagatgttctgggaggtgaca
cgtctacggagggagatgactgtggccaagctgggcttctacctcacagaccaggaatag
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