Oncorhynchus tshawytscha (Chinook salmon): 112237647
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Entry
112237647 CDS
T05605
Symbol
mre11a
Name
(RefSeq) double-strand break repair protein MRE11
KO
K10865
double-strand break repair protein MRE11
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03440
Homologous recombination
otw03450
Non-homologous end-joining
otw04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
112237647 (mre11a)
03450 Non-homologous end-joining
112237647 (mre11a)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
112237647 (mre11a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
otw03032
]
112237647 (mre11a)
03400 DNA repair and recombination proteins [BR:
otw03400
]
112237647 (mre11a)
DNA replication proteins [BR:
otw03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
112237647 (mre11a)
DNA repair and recombination proteins [BR:
otw03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
112237647 (mre11a)
BRCA1-C complex
112237647 (mre11a)
NHEJ (non-homologous end-joining)
MRX complex
112237647 (mre11a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
DUF4194
DUF6227
Motif
Other DBs
NCBI-GeneID:
112237647
NCBI-ProteinID:
XP_042152354
LinkDB
All DBs
Position
LG13:81109187..81125511
Genome browser
AA seq
703 aa
AA seq
DB search
MTSENTLDDEDTFKILIATDIHLGYLEKDAVRGNDTFNTFDEILKCAKQNQVDFILLGGD
LFHENKPSRRCLHSCISLLRKYCMGDTPILFDVLSDQAVNFSNSKFPWVNYQDENLNISI
PVFSVHGNHDDPTGADGLCALDLLSSAGLVNHFGRSQSVERIEISPVLLQKGSTKLALYG
IGSIPDERLYRMFVNNQVTMLRPKEDQDQWFNLFTIHQNRSKHGATNYIPEQFLDDFLDL
VVWGHEHECLINPSRNEQRLFYVTQPGSSVATSLSPGEAVKKHIGLLRVKGRKMNLQKIP
LHTVRQFFIQDLVLSEHPDLFNPDMPKVNQRVEAFCQEKVEAMIEEAERDRLGNPLTPEK
PLIRLRVDYSGGFEAFNATRFSQKFVEQVANPKDVVHFIRQKEYKAKVKGEEDVDFGQLL
SHSSTEGLRVEDLVKEYFLTAEKTVQLSLLTEQGMGKAVQEYVDKEEKDAIEELIRYQLE
KTQRHLQQRGVLTEEEIDQEIRRFRESKKNTAEEDEEVQVALNRAKAHRIERGEDLDLSD
EPDVSMDSDEDSAPPPPTRGRGRGGRGRGRGQTTARRGRGAAEPKPAGRARSQKASVVNP
TQGRNIMDAFQAPPQRPSRGAVAAKSYTDEITIDDDDSDDVSFVKPASRPTPASRPTQRT
SSSSSSRRGSQSQSQSYRGVTFDDDDDEEDFDPFKGSSRSGRR
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgacatcagaaaacaccctggacgatgaggacaccttcaagatcctgatcgccacggat
attcaccttggttacctggagaaagatgctgtccgtggcaacgacacgttcaacaccttc
gacgagatcctgaagtgtgccaaacagaaccaggttgacttcatcctgttgggaggtgat
ctgttccatgagaacaagccttccagacgctgtcttcactcctgcatctctctgctgagg
aagtactgcatgggagacactcctatcctcttcgatgtcctcagtgaccaggctgtcaac
ttcagcaacagcaagtttccgtgggtcaactaccaggatgagaacctgaacatctccatc
cccgtgttcagcgtgcacggtaaccatgacgatcctacaggggcagatggtctgtgtgcg
ttggatctcctgagctctgccggacttgtcaatcattttggccgcagccaatcagtagag
aggatagagattagtcccgtcctcctgcagaaaggcagcactaagctagccctgtacggc
atcggctctattcctgatgagcgcctctacaggatgtttgttaacaaccaggtgaccatg
ctccgccccaaagaagaccaggaccaatggttcaacctcttcaccatccaccagaacagg
agtaagcatggggccaccaactacatcccagagcagtttctggatgactttctggacctg
gtagtgtggggtcatgaacatgagtgtctgataaaccccagcaggaacgaacagcggctg
ttctatgtcacccagcctggtagctctgttgccacgtcactgtcccccggagaggccgtc
aagaagcacataggtctgctgagggtgaaggggcgtaagatgaaccttcagaagatccca
ctgcacacggtgcgtcagttcttcatccaggacctggtcctctcggagcaccctgacctc
ttcaaccctgacatgcccaaggtcaaccagagggtagaggccttctgccaggagaaggtg
gaagcgatgattgaggaagcagagcgagatcgactaggaaacccccttacccctgagaaa
cccctcatacgcctcagagtggactacagcggtggttttgaggccttcaatgccactcgt
ttcagtcagaagtttgtagagcaggttgcaaaccccaaagacgttgttcacttcatcaga
cagaaggagtacaaggccaaagttaaaggtgaagaggatgttgactttgggcagctcctg
agtcactcctcaactgagggtctgagggtggaggacctcgttaaagagtacttcctcaca
gcagaaaagacggtgcagctctccctgctgacggagcagggcatggggaaggcggtgcag
gagtatgtggacaaggaggagaaggatgccatcgaggaactgatcagataccagctggag
aaaacccagagacacctgcagcagagaggagtactgacagaggaggagattgaccaggag
attcgccgtttcagagaatctaagaaaaacactgcagaggaggatgaagaggttcaggtg
gccctcaacagagctaaagctcaccgcatagagcgaggcgaagacctggacctatcagat
gagcctgatgtttccatggattcggacgaggactctgccccgcctccccccaccaggggc
agggggcggggtggcaggggaagggggaggggccaaaccacagccaggagaggaagaggt
gcagcagagccaaagccagcaggtcgggcccgttctcagaaggcctcagtggtcaacccc
acccagggcagaaacatcatggatgcgttccaggctccacctcagcgcccatcgagaggg
gcggtggcggctaaatcttacacagatgagataaccattgatgatgatgactctgacgat
gtttcctttgtgaagcctgcatcaagaccaacacctgcatcacgaccaacacagaggacc
tcctcttcctcctccagtaggcggggttcccagagtcagagccaatcatacagaggagtg
acatttgatgacgacgatgatgaggaggactttgacccgtttaaaggctccagtaggagt
ggccggcgatag
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integrated database retrieval system
